| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1971 |
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| Symbol | |
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| ID | 4627048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 2396646 |
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| End bp | 2399297 |
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| Gene Length | 2652 bp |
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| Protein Length | 883 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639797136 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_943338 |
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| Protein GI | 119945658 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA
[COG0551] Zn-finger domain associated with topoisomerase type I |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.819086 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.697086 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAT TTCTTGTTAT TGTGGAGTCT CCGGCAAAAG CAAAAACGAT CAATAAATAT
CTGGGCAAAG ACTTTATTGT AAAATCAAGC GTAGGTCATA TTCGGGATCT TCCAACCAGC
GGTAGTGCGA AGAAAAAGAT AGAGGCTAAA GGAACTAAGT CTTTGGCAGG TATGACTCCC
GCTAAAAAAG AAAAAGAAAA AGCAAAACGC ACACAAAGTG CCTTGGTCGC TAGAATGGGT
GTTGATCCTA ATGATCACTG GAAAGCAAAT TATGAGATTT TACCGGGCAA AGAAAAAGTA
GTTGCAGAAT TACAAAAATT GGCTGTTGAT GCCCCCATTA TCTATCTCGC AACGGATTTG
GATAGAGAGG GAGAAGCGAT TGCCTGGCAT TTAAGAGAAG TGCTGGGTGG TGAACACCAG
AAATATAAAC GTGTTGTTTT TAATGAAATT ACTGAAACTG CTATTCAGGA GGCTTTTGAG
CATCCTACCG AATTAAATAT TGATGGTGTT AATGCTCAGC AAACCCGCCG TTTTTTAGAT
CGGGTGGTGG GTTTTATGGT TTCTCCGTTA CTTTGGAAAA AGGTTGCCCG GGGATTATCC
GCTGGCAGGG TTCAATCTGT TGCAGTGCGT TTGGTCGTTG AACGTGAACG TTTAATTAAA
GTGTTTAACC CCGTTGAGTT CTGGGATTTA CATGCAGATG TGCAGGATAA GACCAAATCT
GATTTGCGTT TAGAAGTCTT TAAAGAAAAC GGTAAATTTT TTAAGCCTGT GACTGAAACT
GAAACACTTA AAGCGGTCGA TCATCTTAAA TCAGCCGAAT ATAAAGTACT GTCACGTGAA
GATAAACCAA CAACCAGTAA GCCAAGTGCT CCTTTTATAA CTTCGACCCT GCAACAGGCT
GCGAGCACCC GTTTAAGCTT TGGTGTTAAA AAGACCATGA TGCTGGCGCA ACGTCTTTAT
GAAGCCGGTT ATATCACCTA TATGCGTACC GATTCGACTA ACCTGAGTAA AGAGGCAGTG
GGGAGTGCGC GAGACTTCAT CAGTGATGAA TTTGGCAAAA ATTATTTACC GGCAGAACCG
GTCGTTTATA GCAGCAAATC GGGCGCGCAA GAAGCCCATG AAGCAATACG TCCGTCCGAT
GTCGGCCAAT TAGCGGCCTT ACTGGTTGGC GTCGACCGTG ATGCGCAACG TTTGTATGAA
CTTATTTGGC GTCAGTTTCT AGCCTGTCAA ATGCTCCCTG CTTTGTACGA TGCAACCACG
CTTGTGGTAC AGGCGGGTGA TTATCAGCTG CGTGCCAAGG GGCGTACACT GCGCTTTGCA
GGTTGGACAA AGGTGCAGCC TGTGGCTAAA ACTCAGGTGG ATGAAGTACA GTTCCCAGAG
CTCGCCATTG GTGAGGTACT GGAATTAGTC GAGTTGGATC CTAAGCAGCA CTTTACTAAA
CCCCCTGCAC GTTTTACAGA AGCGGCTTTA GTTAAAGAGC TGGAGAAACA AGGTATTGGC
CGTCCATCGA CCTATGCCAG TATTATTTCA ACCATTCAGG ATCGTGGTTA TGTCAAAGTC
GATAAGCGGC GTTTTTATGC GGTTAAAATG GGGGAGATTG TAAGCGATCG TCTTAGTGAA
AATTTTGTTG AGTTAATGAG TTATGATTTT ACCGCGCAAA TGGAACGTAA TCTTGATGCC
ATTGCAGAAG GGAAAGCTAA TTGGACTGAA CAATTAGATG ATTTCTATCA GGATCTCACC
ACACTGTTAG AGAAAGCCGA ACGAGATCCT GAAGAAGGCG GTATGCGCCT TAATGAACCG
GTTATCATTA AGGAGATACA TTGTCCTACT TGTGATCGTG AAATGGGCAT CAGAACAGCT
TCAACGGGGG TCTTTTTAGG CTGTTCTGGA TATGCTCTGC CGCCTAAAGA ACGCTGTAAA
ACAACCATCA ATTTAGTGGA TGGTGAAGAG GTTGTTGATC TTCTATCAAG CGAAGATTTA
GAGACCGCTG CGTTAATGGC TAAACAACGT TGCCCTAAAT GCGATATGGC CATGGACAGT
TATCTGGTTG ATGAGAAAAG AAAACTGCAT GTTTGTGGTA ATAACCCGCT GTGCGATGGT
CATCTTGTTG AATATGGTGA ATTCAAAATC AAAGGTTATG ACGGTCCCGT TGTTGAATGT
GACAAGTGTG GCAGTGATAT GCAGTTAAAA GATGGCCGTT TTGGAAAATA TATGGGCTGC
ACTAATGAAG AGTGTAAAAA TACCCGTAAA ATTTTACGCA GTGGCGAAGT TGCGCCGCCT
AAAGAAGATC CTGTTGATCT GCCGGAATTA GAGTGTGAGC AAAGTGATGC GCATTTCATT
CTCAGAGATG GTGCCTCGGG TATTTTCTTA GCGGCAAATA CGTTTCCTCG TTCTCGAGAA
ACGCGTGCGC CTAAGGTCGC TGAACTGGCG CGTTTTAAAG ATCGTATTTC GCCAAAATTT
TATTATTTGG CCGAAGCACC GCAAAAAGAC CCAGAGGGTA ATTTAGCGGT TGTTCGTTAC
AGTCGGAAAA ACAAAGAACA GTATGTGATG ACTGAGATTG ACAAGAAAGC GACTGGCTGG
ACCGCAAAGT ACATTGATGG TAAATGGGTT GAAGAACAGA CTAAAAAACG GGCTGTTAAA
GCGAAGAAAT AA
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| Protein sequence | MSKFLVIVES PAKAKTINKY LGKDFIVKSS VGHIRDLPTS GSAKKKIEAK GTKSLAGMTP
AKKEKEKAKR TQSALVARMG VDPNDHWKAN YEILPGKEKV VAELQKLAVD APIIYLATDL
DREGEAIAWH LREVLGGEHQ KYKRVVFNEI TETAIQEAFE HPTELNIDGV NAQQTRRFLD
RVVGFMVSPL LWKKVARGLS AGRVQSVAVR LVVERERLIK VFNPVEFWDL HADVQDKTKS
DLRLEVFKEN GKFFKPVTET ETLKAVDHLK SAEYKVLSRE DKPTTSKPSA PFITSTLQQA
ASTRLSFGVK KTMMLAQRLY EAGYITYMRT DSTNLSKEAV GSARDFISDE FGKNYLPAEP
VVYSSKSGAQ EAHEAIRPSD VGQLAALLVG VDRDAQRLYE LIWRQFLACQ MLPALYDATT
LVVQAGDYQL RAKGRTLRFA GWTKVQPVAK TQVDEVQFPE LAIGEVLELV ELDPKQHFTK
PPARFTEAAL VKELEKQGIG RPSTYASIIS TIQDRGYVKV DKRRFYAVKM GEIVSDRLSE
NFVELMSYDF TAQMERNLDA IAEGKANWTE QLDDFYQDLT TLLEKAERDP EEGGMRLNEP
VIIKEIHCPT CDREMGIRTA STGVFLGCSG YALPPKERCK TTINLVDGEE VVDLLSSEDL
ETAALMAKQR CPKCDMAMDS YLVDEKRKLH VCGNNPLCDG HLVEYGEFKI KGYDGPVVEC
DKCGSDMQLK DGRFGKYMGC TNEECKNTRK ILRSGEVAPP KEDPVDLPEL ECEQSDAHFI
LRDGASGIFL AANTFPRSRE TRAPKVAELA RFKDRISPKF YYLAEAPQKD PEGNLAVVRY
SRKNKEQYVM TEIDKKATGW TAKYIDGKWV EEQTKKRAVK AKK
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