Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1957 |
Symbol | |
ID | 4626998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 2380776 |
End bp | 2381675 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639797123 |
Product | ABC transporter substrate binding inner membrane protein |
Protein accession | YP_943325 |
Protein GI | 119945645 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.104929 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.206974 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGAAAA AATCCAGCGC CCCGCGTCAA TCCCTTGGGA ACTTTTTACC AAAACTAGTA GTGGCGCCTA CTTTTGTCGT TGCAGTTATT TTTATCTACG GTTTTATGTT TTTAAATGCG TGGTTATCCT TTAGCTCATC ACGTCTGTTG CCAACCTATG ATTGGGCCGG CACGATACAA TACGAAAAAC TATTCGCCAA TGATCGCTGG TGGGTAGCCG CTGAAAACCT CATGCTGTTT GGTGGTTTGT TCATTGTTAT CTGTTTACTG CTTGGATTAT TTCTGGCCAT TTTTTTGGAT CAGAAAATTC GTGCTGAAGG TGCTATTCGC ACTATCTATT TATACCCGAT GGCACTTTCC TTTATTGTCA CCGGTACTGC TTGGAAATGG ATTTTGAATC CTGAACTGGG TGTTCAACGT TTGGTACGCG AAATGGGCTT TGAATCCTTC ACCTTTGACT GGCTGGTCAA TACCGAAATG GCGATTTATA CCGTTGTTAT CGCGGGAGTC TGGCAATCCT CTGGTTTTGT GATGGCACTC TGCCTCGCAG GTTTACGCGG AATCGATGAT AATATTATCA AAGCCGCTAA AGTTGATGGT GCTTCAATGC CGCTCATTTA CCGTAAAATA ATCATTCCAG GACTGCGCCC GGTATTTTTT AGTGCATTGA TTGTACTGAC TCACATTGCT ATCAAAAGCT TTGATTTGAT TGTTGCCTTA ACAGGGGGCG GCCCGGGTTT TGCAACCGAC GTACCGGCTA CCTTTATGTA TACTTATTCC TTTACTCGCG GACAAATCGG GCTTGGGTCG GCAGCTTCGA TGATGATGTT AATGGCAGTC GCAGCCATTA TTGTGCCTTA CCTGTATTCG GAACTAAGGG AGAAGAAAGA TGAGCATTAA
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Protein sequence | MKKKSSAPRQ SLGNFLPKLV VAPTFVVAVI FIYGFMFLNA WLSFSSSRLL PTYDWAGTIQ YEKLFANDRW WVAAENLMLF GGLFIVICLL LGLFLAIFLD QKIRAEGAIR TIYLYPMALS FIVTGTAWKW ILNPELGVQR LVREMGFESF TFDWLVNTEM AIYTVVIAGV WQSSGFVMAL CLAGLRGIDD NIIKAAKVDG ASMPLIYRKI IIPGLRPVFF SALIVLTHIA IKSFDLIVAL TGGGPGFATD VPATFMYTYS FTRGQIGLGS AASMMMLMAV AAIIVPYLYS ELREKKDEH
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