Gene Ping_1957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1957 
Symbol 
ID4626998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2380776 
End bp2381675 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content44% 
IMG OID639797123 
ProductABC transporter substrate binding inner membrane protein 
Protein accessionYP_943325 
Protein GI119945645 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.104929 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.206974 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGAAAA AATCCAGCGC CCCGCGTCAA TCCCTTGGGA ACTTTTTACC AAAACTAGTA 
GTGGCGCCTA CTTTTGTCGT TGCAGTTATT TTTATCTACG GTTTTATGTT TTTAAATGCG
TGGTTATCCT TTAGCTCATC ACGTCTGTTG CCAACCTATG ATTGGGCCGG CACGATACAA
TACGAAAAAC TATTCGCCAA TGATCGCTGG TGGGTAGCCG CTGAAAACCT CATGCTGTTT
GGTGGTTTGT TCATTGTTAT CTGTTTACTG CTTGGATTAT TTCTGGCCAT TTTTTTGGAT
CAGAAAATTC GTGCTGAAGG TGCTATTCGC ACTATCTATT TATACCCGAT GGCACTTTCC
TTTATTGTCA CCGGTACTGC TTGGAAATGG ATTTTGAATC CTGAACTGGG TGTTCAACGT
TTGGTACGCG AAATGGGCTT TGAATCCTTC ACCTTTGACT GGCTGGTCAA TACCGAAATG
GCGATTTATA CCGTTGTTAT CGCGGGAGTC TGGCAATCCT CTGGTTTTGT GATGGCACTC
TGCCTCGCAG GTTTACGCGG AATCGATGAT AATATTATCA AAGCCGCTAA AGTTGATGGT
GCTTCAATGC CGCTCATTTA CCGTAAAATA ATCATTCCAG GACTGCGCCC GGTATTTTTT
AGTGCATTGA TTGTACTGAC TCACATTGCT ATCAAAAGCT TTGATTTGAT TGTTGCCTTA
ACAGGGGGCG GCCCGGGTTT TGCAACCGAC GTACCGGCTA CCTTTATGTA TACTTATTCC
TTTACTCGCG GACAAATCGG GCTTGGGTCG GCAGCTTCGA TGATGATGTT AATGGCAGTC
GCAGCCATTA TTGTGCCTTA CCTGTATTCG GAACTAAGGG AGAAGAAAGA TGAGCATTAA
 
Protein sequence
MKKKSSAPRQ SLGNFLPKLV VAPTFVVAVI FIYGFMFLNA WLSFSSSRLL PTYDWAGTIQ 
YEKLFANDRW WVAAENLMLF GGLFIVICLL LGLFLAIFLD QKIRAEGAIR TIYLYPMALS
FIVTGTAWKW ILNPELGVQR LVREMGFESF TFDWLVNTEM AIYTVVIAGV WQSSGFVMAL
CLAGLRGIDD NIIKAAKVDG ASMPLIYRKI IIPGLRPVFF SALIVLTHIA IKSFDLIVAL
TGGGPGFATD VPATFMYTYS FTRGQIGLGS AASMMMLMAV AAIIVPYLYS ELREKKDEH