| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1955 |
|---|
| Symbol | |
|---|
| ID | 4626996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 2377614 |
|---|
| End bp | 2378696 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639797121 |
|---|
| Product | alcohol dehydrogenase |
|---|
| Protein accession | YP_943323 |
|---|
| Protein GI | 119945643 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.588479 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.14136 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCCTA GTTCAATGAA AGCTTCAATG ACAGCCATAG TCACCACAGG CAGTGGCGGT
TATGACCAAT TGGTCTGCAA ACAAGTTCCA ATTCCAGATC TCTGCAATGG AGAAGTGCTG
GTTAAAGTGT TGGCCGCCGG CGTTAACAAT ACTGAGATTA ATACCAGACT GGGATGGTAT
TCTTCTTCAG TGCACGGCTC TACCAACGAC ACCTCGAACT CAGAGAAAGA TCAGCCAAAG
GCCGACGGCG GCTGGAATAA GCAAACGGCT TTTCCATTTA TTCAAGGCAC AGATTGCTGT
GGGGTGGTGG TGAATGTGGC AGACGATGTC GATACTGGTC TTATGGACAA ACGGGTACTT
ATCCGGCCCT GTATTCGCGA ACACGGTTTT GGCTCTTTGG ATAATATCTG GATGGGATCT
GATTTTGATG GTGCTTTTGC TGAATATGTG AAAATTCGAG CAACTGAAGT GTTCCCAGTG
GTCTGTAACT GGAGCGATGC AGAACTTGGT ACTATTCCTT GTGCCTATGG TACATCCGAG
AATATGCTCA ACAGGGCCAA TTTGAGAGCC GGTGAAACGG TTTTGGTAGC GGGTGCATCA
GGTGGAGTAG GCTCTGCTAC TGTACAGCTT GCAAAGCGCA GGGGAGCCAA GGTTATCGCC
ATTGCGGGAG AGGAAAAGCA TGACAAAGTA GCTCCGCTTG GCGCAGATAT TCTGTTAGGC
AGAAGCGCTA ATCTGCTTGT GGAATTAGGG GAGCAATCTG TCGATGTTGT GGTTGATAAT
GTGGGCGGAA GTGGTTTTCC GACCATGCTC AAACTATTAA AACGAGGTGG GCGGTTTGTC
TCATCCGGCG CGATTGCAGG GCCTATTGTT GAACTTGATA TGCGCGATAT GTACCTGAAA
GACATCACGC TAATAGGTAC AACCGCTTGG GAGAAAACTG TTTTCCCTGA TCTTGTGCGC
TACATAGAGC AGGGCGAAAT TCACCCCGTG TTAGCGAAGA CCTTTCCGTT ATCTTCGATT
GCCGAAGCTC AAAAAGAGTT TCTTGAGAAA AAGCACGTCG GTAAATTTGT ACTGATACCC
TAA
|
|---|
| Protein sequence | MSPSSMKASM TAIVTTGSGG YDQLVCKQVP IPDLCNGEVL VKVLAAGVNN TEINTRLGWY
SSSVHGSTND TSNSEKDQPK ADGGWNKQTA FPFIQGTDCC GVVVNVADDV DTGLMDKRVL
IRPCIREHGF GSLDNIWMGS DFDGAFAEYV KIRATEVFPV VCNWSDAELG TIPCAYGTSE
NMLNRANLRA GETVLVAGAS GGVGSATVQL AKRRGAKVIA IAGEEKHDKV APLGADILLG
RSANLLVELG EQSVDVVVDN VGGSGFPTML KLLKRGGRFV SSGAIAGPIV ELDMRDMYLK
DITLIGTTAW EKTVFPDLVR YIEQGEIHPV LAKTFPLSSI AEAQKEFLEK KHVGKFVLIP
|
|---|
| |