Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1918 |
Symbol | |
ID | 4624989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 2344107 |
End bp | 2344874 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639797087 |
Product | ABC transporter for amino acids ATP-binding protein |
Protein accession | YP_943289 |
Protein GI | 119945609 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.248915 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0037294 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTAGAG TACAAAATCT AAGCAAAAAA TTTGCTGATA ACATAGTATT AAATGGGATT GATTTCGAAG TTGAACATGG CGAAATCGTG GTCATTATCG GTCCATCTGG TACTGGGAAA TCAACATTAT TACGCTGTTT AAATTATCTG GAAATCCCTA CATCAGGGAT GATTGAGATA GCGGGAGTAA AAGTCGACAG TGCAACCGCG ACAGCAACAC AAATCACCAA TCTGCGAAAA AAGAGTAGCT TTGTATTTCA AAACTACTCT TTATTTTCCA ATAAAACCGC ACTACAAAAT GTTGCAGAAA GTTTGATCAC CGTTTGGAAA GAGCCAAAAT CAGCTGCTTT AAAACATGCT GAAACTATTT TACGACAAGT GGGGCTTAGC GAAAAAATCA ACCAATATCC ATCGCAATTA TCAGGTGGTC AGCAACAACG AGTTGGCATT GCGCGTGCAA TGGCTGCAAA AGGGGAAGTT ATTCTGTTTG ATGAACCAAC CTCGTCGCTG GATCCTGAAT GGGTTGATGA AGTGTTAGCG GTAATGAAGC AATTAGCAGT GCAAAAACAG ACCATGATCA TTGTTACCCA TGAGATGCAG TTTGCGCGAG AGGTTGCTAA TAGAGTTATC TTTATGGAAG GCGGTAATAT CGTCGAGCAG GGCACGCCAA AACAGATATT TGAAAACCCG CAACATCAAC GCACCAAAGA ATTTGTTGGC CGTTCTGCAA AACAAAATCT ATCTGCACTT GATTCCGCAA TGCTTTAA
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Protein sequence | MIRVQNLSKK FADNIVLNGI DFEVEHGEIV VIIGPSGTGK STLLRCLNYL EIPTSGMIEI AGVKVDSATA TATQITNLRK KSSFVFQNYS LFSNKTALQN VAESLITVWK EPKSAALKHA ETILRQVGLS EKINQYPSQL SGGQQQRVGI ARAMAAKGEV ILFDEPTSSL DPEWVDEVLA VMKQLAVQKQ TMIIVTHEMQ FAREVANRVI FMEGGNIVEQ GTPKQIFENP QHQRTKEFVG RSAKQNLSAL DSAML
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