Gene Ping_1918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1918 
Symbol 
ID4624989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2344107 
End bp2344874 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content40% 
IMG OID639797087 
ProductABC transporter for amino acids ATP-binding protein 
Protein accessionYP_943289 
Protein GI119945609 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.248915 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0037294 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTAGAG TACAAAATCT AAGCAAAAAA TTTGCTGATA ACATAGTATT AAATGGGATT 
GATTTCGAAG TTGAACATGG CGAAATCGTG GTCATTATCG GTCCATCTGG TACTGGGAAA
TCAACATTAT TACGCTGTTT AAATTATCTG GAAATCCCTA CATCAGGGAT GATTGAGATA
GCGGGAGTAA AAGTCGACAG TGCAACCGCG ACAGCAACAC AAATCACCAA TCTGCGAAAA
AAGAGTAGCT TTGTATTTCA AAACTACTCT TTATTTTCCA ATAAAACCGC ACTACAAAAT
GTTGCAGAAA GTTTGATCAC CGTTTGGAAA GAGCCAAAAT CAGCTGCTTT AAAACATGCT
GAAACTATTT TACGACAAGT GGGGCTTAGC GAAAAAATCA ACCAATATCC ATCGCAATTA
TCAGGTGGTC AGCAACAACG AGTTGGCATT GCGCGTGCAA TGGCTGCAAA AGGGGAAGTT
ATTCTGTTTG ATGAACCAAC CTCGTCGCTG GATCCTGAAT GGGTTGATGA AGTGTTAGCG
GTAATGAAGC AATTAGCAGT GCAAAAACAG ACCATGATCA TTGTTACCCA TGAGATGCAG
TTTGCGCGAG AGGTTGCTAA TAGAGTTATC TTTATGGAAG GCGGTAATAT CGTCGAGCAG
GGCACGCCAA AACAGATATT TGAAAACCCG CAACATCAAC GCACCAAAGA ATTTGTTGGC
CGTTCTGCAA AACAAAATCT ATCTGCACTT GATTCCGCAA TGCTTTAA
 
Protein sequence
MIRVQNLSKK FADNIVLNGI DFEVEHGEIV VIIGPSGTGK STLLRCLNYL EIPTSGMIEI 
AGVKVDSATA TATQITNLRK KSSFVFQNYS LFSNKTALQN VAESLITVWK EPKSAALKHA
ETILRQVGLS EKINQYPSQL SGGQQQRVGI ARAMAAKGEV ILFDEPTSSL DPEWVDEVLA
VMKQLAVQKQ TMIIVTHEMQ FAREVANRVI FMEGGNIVEQ GTPKQIFENP QHQRTKEFVG
RSAKQNLSAL DSAML