Gene Ping_1915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1915 
Symbol 
ID4624986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2340718 
End bp2342445 
Gene Length1728 bp 
Protein Length575 aa 
Translation table11 
GC content39% 
IMG OID639797084 
Productsurface antigen (D15) 
Protein accessionYP_943286 
Protein GI119945606 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0729] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.246842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0100244 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTT CTAAAACTTT ATTTTTCCTG TTAGCGCTGC TTGTGCATAG TAGTCTCTAT 
GCAGATGTTA TATTTTCAAT AAAAGGAATC GATAATAAGG ATGTAAAAGA AAACATCGTT
GTTTTTTTGA AAGGATTGTC ACAACCTCAG AATGCTAATA GCCAAAGTTA TTTACAACAA
GTACAAAGTT CAACCCGGCA AGCAGTGACT GCTTTAGGCT ATTATCAAAT GAAGCTGGAC
ATTAATGTTA CAGGCGAAGC AGGAAAACAG ACCGTCACAC TGCTCGTTAA CCTTGGAATG
GCCACCCGTA TTACTGCGTT AAATTTAAAA CTGCTCGGTG AGGGAAGCTC AGATCCCGAC
TTCTTAAAAA TAGTTAAAAA TTTTCCGCTT AAAAAAAATG ATATTCTCCA CCATGGCAAA
TATGAGCAAG GGAAAAACCA ACTTAAAAAT ATGGCTCAAC AACATGGTTA TTTTGATGCG
AAATTTTCCC AGGCATCCGT TGATGTTATT TCCAAAAATA ACAGTGCCAC TGTTAACATT
CGGTTTGATA CCGGTATTCG CTACCAGTTT GGTGAATTGT TTTTTTCTCC AGAAGATTTA
CCCGCCAAAA AACTTATCTC TTCATTACAA AACTTTAAAG CTGGCGATCC CTACGATTCT
CAAACCTTAA TGAAATTTAA TACGGAAACA AATAGAACGG GTTATTTTAA AAACATCTCC
ATTGTACCCG AAATTAAAAA AAAGCAGGGA CGCGAGATTC CACTTTTAGT GCTTGCCAAA
ATGCGCCCTA AAGACTCCTT TAATGCAGGT ATTGGGGTTA GTACAGATGA AGGTATTCGG
GGTAAGTTCC GCTGGACAAG ACCCTGGGTA AATCAATATG GCCATAGCAT AGTGGGTAAT
GTTGTCGCCT CCGTACCTCG GCAAGAAGCC TCCTTAGCCT ATAACATTCC TATTAGTGAT
CCTCTTTACC ATTATTACTC GATTAAAACA GGCTATAAAT TTGTTGATGA CAATGATACC
AATACCCAAC AATATTTATT TAGTGTCGGT CGCTATAAAC GTTTAGAAAA TAATTGGTTA
CGCAATGTAT TTGTTAAATA TCATAATGAG ACCGGAGAGC AGGGGCAGGA CGATTTTTCT
GCTGAATTAA TTATGCCGGG AGTCAGTTTT AGCCGCATCA GATTACGTGG TGGTCTTCAT
CCAACTTGGG GAGATACCCA GCAATACGAA ATCGCTGTGG CCCATAAAAG TTTATTTTCA
AGTTCTAATT TATTTAAAAT TTATGGAAAA GCAAAATTTT TGCGTAGCTA TAATAAGCAG
CAATTTTTCA GCACCACGGA AGTGGGCGCG CTTTATACTG ATTCTATCTA TAACGTGCCA
GCTTCCATGC GGTTTTTTGC CGGGGGTGAT CAAAGTATTC GCGGTTACAG TTACGAGAGT
ATCTCCCCAG AAGATAATGA TGGATATTTA ATCGGAGGAA AATATCTCGC CGTGCAAAGT
TTAGAATATC GTTTCCCAGT GGCCAATAAT TGGAAGGTGG CGACCTTTAT TGATGCCGGA
ACTGCTACCT CTACCTTCAG TGAGCCGATT TCCGTTGGTG CTGGTCTTGG TATTATTTGG
TCATCTCCGA TCGGCCCAGT TAGATTTTAT GCGGCAGCGC CCGTGAACAA TGCCGATACA
ACGCTTAATA AATGGATGCT GCACTTTATG ATTGGACCTG AATTATGA
 
Protein sequence
MKISKTLFFL LALLVHSSLY ADVIFSIKGI DNKDVKENIV VFLKGLSQPQ NANSQSYLQQ 
VQSSTRQAVT ALGYYQMKLD INVTGEAGKQ TVTLLVNLGM ATRITALNLK LLGEGSSDPD
FLKIVKNFPL KKNDILHHGK YEQGKNQLKN MAQQHGYFDA KFSQASVDVI SKNNSATVNI
RFDTGIRYQF GELFFSPEDL PAKKLISSLQ NFKAGDPYDS QTLMKFNTET NRTGYFKNIS
IVPEIKKKQG REIPLLVLAK MRPKDSFNAG IGVSTDEGIR GKFRWTRPWV NQYGHSIVGN
VVASVPRQEA SLAYNIPISD PLYHYYSIKT GYKFVDDNDT NTQQYLFSVG RYKRLENNWL
RNVFVKYHNE TGEQGQDDFS AELIMPGVSF SRIRLRGGLH PTWGDTQQYE IAVAHKSLFS
SSNLFKIYGK AKFLRSYNKQ QFFSTTEVGA LYTDSIYNVP ASMRFFAGGD QSIRGYSYES
ISPEDNDGYL IGGKYLAVQS LEYRFPVANN WKVATFIDAG TATSTFSEPI SVGAGLGIIW
SSPIGPVRFY AAAPVNNADT TLNKWMLHFM IGPEL