Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1915 |
Symbol | |
ID | 4624986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 2340718 |
End bp | 2342445 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639797084 |
Product | surface antigen (D15) |
Protein accession | YP_943286 |
Protein GI | 119945606 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0729] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.246842 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0100244 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTT CTAAAACTTT ATTTTTCCTG TTAGCGCTGC TTGTGCATAG TAGTCTCTAT GCAGATGTTA TATTTTCAAT AAAAGGAATC GATAATAAGG ATGTAAAAGA AAACATCGTT GTTTTTTTGA AAGGATTGTC ACAACCTCAG AATGCTAATA GCCAAAGTTA TTTACAACAA GTACAAAGTT CAACCCGGCA AGCAGTGACT GCTTTAGGCT ATTATCAAAT GAAGCTGGAC ATTAATGTTA CAGGCGAAGC AGGAAAACAG ACCGTCACAC TGCTCGTTAA CCTTGGAATG GCCACCCGTA TTACTGCGTT AAATTTAAAA CTGCTCGGTG AGGGAAGCTC AGATCCCGAC TTCTTAAAAA TAGTTAAAAA TTTTCCGCTT AAAAAAAATG ATATTCTCCA CCATGGCAAA TATGAGCAAG GGAAAAACCA ACTTAAAAAT ATGGCTCAAC AACATGGTTA TTTTGATGCG AAATTTTCCC AGGCATCCGT TGATGTTATT TCCAAAAATA ACAGTGCCAC TGTTAACATT CGGTTTGATA CCGGTATTCG CTACCAGTTT GGTGAATTGT TTTTTTCTCC AGAAGATTTA CCCGCCAAAA AACTTATCTC TTCATTACAA AACTTTAAAG CTGGCGATCC CTACGATTCT CAAACCTTAA TGAAATTTAA TACGGAAACA AATAGAACGG GTTATTTTAA AAACATCTCC ATTGTACCCG AAATTAAAAA AAAGCAGGGA CGCGAGATTC CACTTTTAGT GCTTGCCAAA ATGCGCCCTA AAGACTCCTT TAATGCAGGT ATTGGGGTTA GTACAGATGA AGGTATTCGG GGTAAGTTCC GCTGGACAAG ACCCTGGGTA AATCAATATG GCCATAGCAT AGTGGGTAAT GTTGTCGCCT CCGTACCTCG GCAAGAAGCC TCCTTAGCCT ATAACATTCC TATTAGTGAT CCTCTTTACC ATTATTACTC GATTAAAACA GGCTATAAAT TTGTTGATGA CAATGATACC AATACCCAAC AATATTTATT TAGTGTCGGT CGCTATAAAC GTTTAGAAAA TAATTGGTTA CGCAATGTAT TTGTTAAATA TCATAATGAG ACCGGAGAGC AGGGGCAGGA CGATTTTTCT GCTGAATTAA TTATGCCGGG AGTCAGTTTT AGCCGCATCA GATTACGTGG TGGTCTTCAT CCAACTTGGG GAGATACCCA GCAATACGAA ATCGCTGTGG CCCATAAAAG TTTATTTTCA AGTTCTAATT TATTTAAAAT TTATGGAAAA GCAAAATTTT TGCGTAGCTA TAATAAGCAG CAATTTTTCA GCACCACGGA AGTGGGCGCG CTTTATACTG ATTCTATCTA TAACGTGCCA GCTTCCATGC GGTTTTTTGC CGGGGGTGAT CAAAGTATTC GCGGTTACAG TTACGAGAGT ATCTCCCCAG AAGATAATGA TGGATATTTA ATCGGAGGAA AATATCTCGC CGTGCAAAGT TTAGAATATC GTTTCCCAGT GGCCAATAAT TGGAAGGTGG CGACCTTTAT TGATGCCGGA ACTGCTACCT CTACCTTCAG TGAGCCGATT TCCGTTGGTG CTGGTCTTGG TATTATTTGG TCATCTCCGA TCGGCCCAGT TAGATTTTAT GCGGCAGCGC CCGTGAACAA TGCCGATACA ACGCTTAATA AATGGATGCT GCACTTTATG ATTGGACCTG AATTATGA
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Protein sequence | MKISKTLFFL LALLVHSSLY ADVIFSIKGI DNKDVKENIV VFLKGLSQPQ NANSQSYLQQ VQSSTRQAVT ALGYYQMKLD INVTGEAGKQ TVTLLVNLGM ATRITALNLK LLGEGSSDPD FLKIVKNFPL KKNDILHHGK YEQGKNQLKN MAQQHGYFDA KFSQASVDVI SKNNSATVNI RFDTGIRYQF GELFFSPEDL PAKKLISSLQ NFKAGDPYDS QTLMKFNTET NRTGYFKNIS IVPEIKKKQG REIPLLVLAK MRPKDSFNAG IGVSTDEGIR GKFRWTRPWV NQYGHSIVGN VVASVPRQEA SLAYNIPISD PLYHYYSIKT GYKFVDDNDT NTQQYLFSVG RYKRLENNWL RNVFVKYHNE TGEQGQDDFS AELIMPGVSF SRIRLRGGLH PTWGDTQQYE IAVAHKSLFS SSNLFKIYGK AKFLRSYNKQ QFFSTTEVGA LYTDSIYNVP ASMRFFAGGD QSIRGYSYES ISPEDNDGYL IGGKYLAVQS LEYRFPVANN WKVATFIDAG TATSTFSEPI SVGAGLGIIW SSPIGPVRFY AAAPVNNADT TLNKWMLHFM IGPEL
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