Gene Ping_1908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1908 
Symbol 
ID4624979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2328157 
End bp2329749 
Gene Length1593 bp 
Protein Length530 aa 
Translation table11 
GC content36% 
IMG OID639797080 
Producthypothetical protein 
Protein accessionYP_943282 
Protein GI119945602 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000431141 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00104441 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGGCCAAT TAGCATATTT ACCGAATAGC ACACAACTGA CGAATAACTA TTTATTTATA 
GAGCACAGCT TTCCGGAACT TTATCGTTTA AGCCAAGAGG TAGAAAAACA CTATTCAACG
GATCACTCCT GCTGTTTACT AAAAGCGCGC ATGTTTGTTG AACTGTGGTG CCATGAAGTA
GGAGCAAAAC TAAATTTATA TCCTCCCATC ACTGGAGACT TAAATAGCAA AATAAAGCAA
ATTTCATATA GTCATAAAGT GCCGGGTTAT ATTCTTGATA CACTGAATAA GTTGCGTATT
GAAGGGAATA AAAGTGCTCA TATTTTAAAA CGTTATGATG GTTCATGGAG TTGTGAATAC
GCATTAAGTA AATACAAGTT AGATAACTTA ATGAAAAGCT TATTAGAGAT AACCCAATAC
CTTGCTTATA AATTAAATAT GCAAAACGAT TCTGAGCTTA ATGTGTGGCA AGAACCCACT
AAGTTAGCAC TGCAAGAAGA TATTTATGGA TCACTCTTAG GTAATAAAGA AGCGACATAT
TCACTTGCTA AACATTATGC AATAAAAATG CAGCAAGCAA CTGAACATAA TCAAATATCA
GGCAAAGAAA ATAAAGCAAA AATGCAATTA CTGCAACATG ATTTAGCTTA CTGGTTGGCT
CGTGCGCATA AGCAGGATCA CCAGGAAACC TGGTTACTTT ATGCCGAAGT TTATAAAAAT
AAATTCCTGC CATTACCAGA AAATATAACC GTTGAAAGTT GTTTTAAAGA AGCTTTAAAA
AATGATGATT CAGGTGAAGT CCCCTCTCAA TATGCGGCAT ACCTGTTACA AAATTCTCAA
CATAAACGTG GTGTTAACTT CATACATCAA GCCGCTGAAA AAGCTAACCA CGATGCCATT
AAAGCGCTAC AAACCTATTA TTACGAAAAA GACCAAAAAC AGTATTTAAA GTGGGTTGAT
GCAGGCATTA ATGCCTACGT AAAACAGTCT TTTATCTTAG ACTTCGCACA TAAATTAGAT
GTTTGGGAAA AAGACAAAGA AAATCAACTC CTTCAAAAAC AGGTTAAAAC AGCACTCATT
AATGCGCAAT CACATCAGTC GGAGGGTCTA AAATACTTTC AAGGTTATTG TGATTATTAT
GGTTATTGGG GTAAAAATTC CAATCCAGAG CAAGGTTTAA ATCTCATGGT TGATAGTCAT
GAGCAACTTC CTGCTTTCCT TCATTATGAA GATAAACTAT TTAACCTGTT AAAAAATAAA
CCTGAGCATT CAGATCTTGC ATTAGAGATT TCAAACAGAG CGCTATCTTG CACTAGTGGG
ACAAGCAAAG CGCAAATGCA GTTTGACCTT GCAATGTTAA TTTGGCAAAA ACTGCGAGCA
GATCACCAAG TGAAATGTTC TCATTCACTA AAAGTACTGA TCAGGGAATC AGCAAAAAGT
GGCTGTGTTG ATGCCCAGCA ATTTATGAAA TCCCCGAAAG GAAAAGCATT AATGCAGGAT
AACAGTGTTA TATGCCAAAA TAATGGCAAA AAATCAGTCG ATAGGAAGAA ATTACAACAA
GCGAAAAAAA ACGCGCGCAG AGCGAAACGC TAA
 
Protein sequence
MGQLAYLPNS TQLTNNYLFI EHSFPELYRL SQEVEKHYST DHSCCLLKAR MFVELWCHEV 
GAKLNLYPPI TGDLNSKIKQ ISYSHKVPGY ILDTLNKLRI EGNKSAHILK RYDGSWSCEY
ALSKYKLDNL MKSLLEITQY LAYKLNMQND SELNVWQEPT KLALQEDIYG SLLGNKEATY
SLAKHYAIKM QQATEHNQIS GKENKAKMQL LQHDLAYWLA RAHKQDHQET WLLYAEVYKN
KFLPLPENIT VESCFKEALK NDDSGEVPSQ YAAYLLQNSQ HKRGVNFIHQ AAEKANHDAI
KALQTYYYEK DQKQYLKWVD AGINAYVKQS FILDFAHKLD VWEKDKENQL LQKQVKTALI
NAQSHQSEGL KYFQGYCDYY GYWGKNSNPE QGLNLMVDSH EQLPAFLHYE DKLFNLLKNK
PEHSDLALEI SNRALSCTSG TSKAQMQFDL AMLIWQKLRA DHQVKCSHSL KVLIRESAKS
GCVDAQQFMK SPKGKALMQD NSVICQNNGK KSVDRKKLQQ AKKNARRAKR