Gene Ping_1905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1905 
Symbol 
ID4624916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2324510 
End bp2325157 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content41% 
IMG OID639797077 
Producthypothetical protein 
Protein accessionYP_943279 
Protein GI119945599 
COG category[S] Function unknown 
COG ID[COG3132] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0011352 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00151074 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATATCG AATTTTCAAA TATTGAAGCC CGTGTTATCG GCTGCCTAAT GGAGAAAGAG 
CTAACAACCC CTGACTTATA CCCCCTTACT TTAAATAGTT TAACCAATGC ATGTAACCAG
AAAAGCAACC GCGATCCGGT AATGTTACTC TCGGAAGCGG AAGTGTTAGA TGCTGTGGAC
GCTTTAATAG AAAAACGTTT AATAAACGAT GAAAGTGGTT TTCATGGCCG TGTAACAAAG
TACCGGCACC GTTTTTGTAA CACCGAATTT GGCAATTTTC AATTTACTGG GCAAGAAAAA
GGCATTATCT GCTGCATGCT ATTAAGGGGG GCGCAAACGC CCGGAGAGCT AAGAACAAGA
TCCCATAGAC TATGCCAGTT TATTGATGTA AAAGAGGTTG AGAATGTCCT TGATAAATTA
GTCCAGGATT CACTGGTCGT TAAATTACCC CGTGAAGCTG GAAAGCGCGA TAGCCGTTAT
ATGCATCAAT TTAGTGGTGA AGTTGATCTT GCTGAAGTTC CCCTTACAGT GGCGCCTGTA
TCAGAAGTTG TGCAGGGAGA TGATCGCATT GAACAATTAG AAAAAGACTT ATCTGCACTG
AAGAATGAAG TGTCTGAATT AAGATATCTT ATTGAGCAGA GACTATAA
 
Protein sequence
MNIEFSNIEA RVIGCLMEKE LTTPDLYPLT LNSLTNACNQ KSNRDPVMLL SEAEVLDAVD 
ALIEKRLIND ESGFHGRVTK YRHRFCNTEF GNFQFTGQEK GIICCMLLRG AQTPGELRTR
SHRLCQFIDV KEVENVLDKL VQDSLVVKLP REAGKRDSRY MHQFSGEVDL AEVPLTVAPV
SEVVQGDDRI EQLEKDLSAL KNEVSELRYL IEQRL