Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1899 |
Symbol | |
ID | 4624910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 2310659 |
End bp | 2312308 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639797071 |
Product | hypothetical protein |
Protein accession | YP_943273 |
Protein GI | 119945593 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.571929 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00194399 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAATGTG ATGATATTTC CAGCCAATAT TTAACCCTAG TCGATGCGAT TAAAGCACTT GCTGATAATA GTGATGTAGA CAAACAGTTC TCTATTGCAC AGTCTGCTTT TATTAAAGCA GAAAAAGCCG TTGTTGGCGC ATTATCTGAT CTGCAGCTAT TAGAAGAACT TGAGTCAAAA AAGCGCAAGC TTGCGGATAT GCATATTGCA CTTGCAAAAC AGGAATTTTT ATACAAAAAA TGTTTATCAA CTTTATCAAA ATTGCAGCAT GAATGCTTGC CCTGGTGGCA TTATCGTATT TTAAAAGCAT GCAAAATGCG TGACATTATC AAGACATATA AACCGAGGGT TGATAAACAA AAAAACCTGT TTGTGCAGTT AAAAAGTGAC TATGATATTT TTTCGGCTAA ATTAACCCAG GAAATAAAAG CGTGTGCGGT GATATGTAAA GTTCATTATG ATGTTGTGTT CGCCCAAGCT GATATTAATT TAGACAGTTC AGAAATTCAG CGTAAAGCCT TTGGGCACAG TACTCAGTTA AATTTATTAC GTTCGCAGTT ATCTGCCTGT GCATTTGAAC TTCATCAAGC CTGGTTGGTC GCCAGTTACA AAAGTGGTTT TTCTCAAACT ATTAATAAAT TACCCGGTCT TTTACAAAAT AAAATAGCAC TGCCGGCGGA TGCAAAAATA ATGTGGCAAT GCCTGTTTAT GGTATGTCCT GTTGTGTCAT CTGCTTTTGC ATCCGTTGCC AATCAATTTT CTAAACTTGG CCAAGGTGAT ATTGGCTGGT TATTTATTGA TGAGTCAGGT CAGGCAACAC CACCTCAAGC TATCGGTGCA TTATTAAGAG CTAAACATGC CGTGGTGGTA GGCGATCCAC TGCAAATCGA ACCCGTATTT ACAACTCCCC CTGATATTGT TGAATATTTA GGACGACGTT TATTAAAAGG TGATTGGCAG ACTTGGTCAC CGTCAGTGGT ATCCGTACAA GAATTAGCGG ATAGAGCGAA TCCTTTTGGA ACGAAAAAAA TAGCAATAGG GAAATGGTTG GGTAGCCCGC TGCGTGTTCA TCGGCGCTGC AGTGATCCGA TGTTTTCTAT TTCGAATCAA ATCGCCTATA ACAATAAAAT GATGCATGGC TTAAATGATA TAACAGAACA GGAACCCTTC GTCTGGGGAC CAAGTGGTTG GTTCGATGTA AAAGGAAATG AAAAAAGCAA ACATTATGTG CCGAAGCAGG CTGAGCATGT ATTATCTATG TTGTATAAAT TTGTTGAACG TTATAAAAAA TTACCCGATT GTTATATTAT TTCGCCTTTT AGTAATGTTA AATTTGAGGT TAACAGCTAC CTTAATAAAA ATTTCAATCA TAAGAATATT CAACAAGCAG ATTTTAATGC GTGGTTAGAA GGACGAGTGG GTACTGTTCA TACCTTTCAA GGTAAAGAGG AGGAATTAGT TATTTTTATT TTAGGTGCTT CCGACAGTGC TGGTGCCGCT AACTGGGCAG CGGGCAAACC TAACTTATTA AATGTTGCAG TAACCAGAGC TAAAAAACGG GTTTATCTGA TTGGTTGTTA TAAAAGATGG TCGGCTTTAC CTCATTTTGA AGATGCCTTT GGCCTGTTAA ATGAAAGTAT CATTGATTAA
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Protein sequence | MQCDDISSQY LTLVDAIKAL ADNSDVDKQF SIAQSAFIKA EKAVVGALSD LQLLEELESK KRKLADMHIA LAKQEFLYKK CLSTLSKLQH ECLPWWHYRI LKACKMRDII KTYKPRVDKQ KNLFVQLKSD YDIFSAKLTQ EIKACAVICK VHYDVVFAQA DINLDSSEIQ RKAFGHSTQL NLLRSQLSAC AFELHQAWLV ASYKSGFSQT INKLPGLLQN KIALPADAKI MWQCLFMVCP VVSSAFASVA NQFSKLGQGD IGWLFIDESG QATPPQAIGA LLRAKHAVVV GDPLQIEPVF TTPPDIVEYL GRRLLKGDWQ TWSPSVVSVQ ELADRANPFG TKKIAIGKWL GSPLRVHRRC SDPMFSISNQ IAYNNKMMHG LNDITEQEPF VWGPSGWFDV KGNEKSKHYV PKQAEHVLSM LYKFVERYKK LPDCYIISPF SNVKFEVNSY LNKNFNHKNI QQADFNAWLE GRVGTVHTFQ GKEEELVIFI LGASDSAGAA NWAAGKPNLL NVAVTRAKKR VYLIGCYKRW SALPHFEDAF GLLNESIID
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