Gene Ping_1899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1899 
Symbol 
ID4624910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2310659 
End bp2312308 
Gene Length1650 bp 
Protein Length549 aa 
Translation table11 
GC content38% 
IMG OID639797071 
Producthypothetical protein 
Protein accessionYP_943273 
Protein GI119945593 
COG category[L] Replication, recombination and repair 
COG ID[COG1112] Superfamily I DNA and RNA helicases and helicase subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.571929 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00194399 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAATGTG ATGATATTTC CAGCCAATAT TTAACCCTAG TCGATGCGAT TAAAGCACTT 
GCTGATAATA GTGATGTAGA CAAACAGTTC TCTATTGCAC AGTCTGCTTT TATTAAAGCA
GAAAAAGCCG TTGTTGGCGC ATTATCTGAT CTGCAGCTAT TAGAAGAACT TGAGTCAAAA
AAGCGCAAGC TTGCGGATAT GCATATTGCA CTTGCAAAAC AGGAATTTTT ATACAAAAAA
TGTTTATCAA CTTTATCAAA ATTGCAGCAT GAATGCTTGC CCTGGTGGCA TTATCGTATT
TTAAAAGCAT GCAAAATGCG TGACATTATC AAGACATATA AACCGAGGGT TGATAAACAA
AAAAACCTGT TTGTGCAGTT AAAAAGTGAC TATGATATTT TTTCGGCTAA ATTAACCCAG
GAAATAAAAG CGTGTGCGGT GATATGTAAA GTTCATTATG ATGTTGTGTT CGCCCAAGCT
GATATTAATT TAGACAGTTC AGAAATTCAG CGTAAAGCCT TTGGGCACAG TACTCAGTTA
AATTTATTAC GTTCGCAGTT ATCTGCCTGT GCATTTGAAC TTCATCAAGC CTGGTTGGTC
GCCAGTTACA AAAGTGGTTT TTCTCAAACT ATTAATAAAT TACCCGGTCT TTTACAAAAT
AAAATAGCAC TGCCGGCGGA TGCAAAAATA ATGTGGCAAT GCCTGTTTAT GGTATGTCCT
GTTGTGTCAT CTGCTTTTGC ATCCGTTGCC AATCAATTTT CTAAACTTGG CCAAGGTGAT
ATTGGCTGGT TATTTATTGA TGAGTCAGGT CAGGCAACAC CACCTCAAGC TATCGGTGCA
TTATTAAGAG CTAAACATGC CGTGGTGGTA GGCGATCCAC TGCAAATCGA ACCCGTATTT
ACAACTCCCC CTGATATTGT TGAATATTTA GGACGACGTT TATTAAAAGG TGATTGGCAG
ACTTGGTCAC CGTCAGTGGT ATCCGTACAA GAATTAGCGG ATAGAGCGAA TCCTTTTGGA
ACGAAAAAAA TAGCAATAGG GAAATGGTTG GGTAGCCCGC TGCGTGTTCA TCGGCGCTGC
AGTGATCCGA TGTTTTCTAT TTCGAATCAA ATCGCCTATA ACAATAAAAT GATGCATGGC
TTAAATGATA TAACAGAACA GGAACCCTTC GTCTGGGGAC CAAGTGGTTG GTTCGATGTA
AAAGGAAATG AAAAAAGCAA ACATTATGTG CCGAAGCAGG CTGAGCATGT ATTATCTATG
TTGTATAAAT TTGTTGAACG TTATAAAAAA TTACCCGATT GTTATATTAT TTCGCCTTTT
AGTAATGTTA AATTTGAGGT TAACAGCTAC CTTAATAAAA ATTTCAATCA TAAGAATATT
CAACAAGCAG ATTTTAATGC GTGGTTAGAA GGACGAGTGG GTACTGTTCA TACCTTTCAA
GGTAAAGAGG AGGAATTAGT TATTTTTATT TTAGGTGCTT CCGACAGTGC TGGTGCCGCT
AACTGGGCAG CGGGCAAACC TAACTTATTA AATGTTGCAG TAACCAGAGC TAAAAAACGG
GTTTATCTGA TTGGTTGTTA TAAAAGATGG TCGGCTTTAC CTCATTTTGA AGATGCCTTT
GGCCTGTTAA ATGAAAGTAT CATTGATTAA
 
Protein sequence
MQCDDISSQY LTLVDAIKAL ADNSDVDKQF SIAQSAFIKA EKAVVGALSD LQLLEELESK 
KRKLADMHIA LAKQEFLYKK CLSTLSKLQH ECLPWWHYRI LKACKMRDII KTYKPRVDKQ
KNLFVQLKSD YDIFSAKLTQ EIKACAVICK VHYDVVFAQA DINLDSSEIQ RKAFGHSTQL
NLLRSQLSAC AFELHQAWLV ASYKSGFSQT INKLPGLLQN KIALPADAKI MWQCLFMVCP
VVSSAFASVA NQFSKLGQGD IGWLFIDESG QATPPQAIGA LLRAKHAVVV GDPLQIEPVF
TTPPDIVEYL GRRLLKGDWQ TWSPSVVSVQ ELADRANPFG TKKIAIGKWL GSPLRVHRRC
SDPMFSISNQ IAYNNKMMHG LNDITEQEPF VWGPSGWFDV KGNEKSKHYV PKQAEHVLSM
LYKFVERYKK LPDCYIISPF SNVKFEVNSY LNKNFNHKNI QQADFNAWLE GRVGTVHTFQ
GKEEELVIFI LGASDSAGAA NWAAGKPNLL NVAVTRAKKR VYLIGCYKRW SALPHFEDAF
GLLNESIID