| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1888 |
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| Symbol | |
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| ID | 4624865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 2293464 |
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| End bp | 2294921 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639797061 |
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| Product | succinic semialdehyde dehydrogenase |
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| Protein accession | YP_943263 |
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| Protein GI | 119945583 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000160423 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0242248 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCACGAGA TACAAGATAG TCAATTAATC AAAACCTTTT CATATATTGA TGGCAGCTGG
CATAGCAGTG AATCTTATTT TAATGTTACC AATCCTGCTA CGGATGAAGT CCTTGTTAAA
GTATGTAATG CAGGGATTGT TGAAACTGAG CTTGCTGTAA AAGCGGCAAA AACTGCTTTA
AAATCTTGGT CAGCAAAATC TGCTAATGAA CGCGCATCGT TAATGCGTAA CTGGTTCAAT
TTAATGATCC AACACCAGGA TGATTTAGCG CGCATTCTAA CGCTTGAGCA GGGTAAACCT
TTTGTCGAAG CAAAAGGGGA AATCGCCTAT GGTGCGGCTT TTGTTGATTG GTTTGCCGAA
GAAGGAAAAC GCGTTTACGG TGATGTTATT CCCGGACCAT CGGGTGACAA GCGTGTCATC
GTGGTTAAAC AACCCGTTGG TGTCGTCGCC TCAATCACTC CTTGGAACTT TCCAAATGCA
ATGATTGCAC GAAAAGCAGC AGCGGCGTTA GCGGCAGGTT GTACCTTCGT TGTTCGCCCC
GCAACACAAA CACCGCTGTC TGCACTTGCA ATGGCAGAAC TTGCTGAAAG AGCGGGTATT
CCAGCGGGTG TCTTTAACGT GGTCGTCGGT GAAGATGCAT CGGGCATGGG CAAAGTACTA
ACTCAGCACC CTGATATTGC TAAATTTACG TTCACCGGAT CAACAAAAAT CGGTAAACTA
TTAATTGGCC AATGTGCGAC TACCGTAAAA AAAGTATCAA TGGAATTGGG CGGTAATGCT
CCCTTTATTG TCTTCGATGA TGCAGATATC GATGCTGCTG TAGAAGGCGC AATAGCCTCT
AAATATCGTA ATGCAGGACA AACCTGTGTG TGCACCAACC GCATTTTTGT ACAAAATAAG
GTACTTGATT TATTCACTGA AAAATTTAGC GCTGCAGTGG CTAAATTATC ATTAGGCAAT
GGTTTAACCG ACGGCGTCAA TATAGGTCCA ATGATCTCAA CTACCGCCGT TGATGGTGTG
AATAAGCTGG TAGCTGACTC TGTTGCACAG GGCGCAAAGG TTCTCTTAGG CGGACAGCGA
GATAGTGCCG GTGACAACTT CTATCAAGCA ACTATTTTGA CCAATGTAAG TAATGACATG
CCGGTTGCAC GCAACGAAAT CTTTGGCCCT GTCTCGCCAA TTATTGCCTT TGACGATGAA
GATCAAGTGA TTGCCATGGC AAATGATACT GAATATGGCC TAGCCGCTTA TTTTTACTCC
CGTGATATCG GTCGCGTTTG GCGCGTTGCA GAAGGCCTTG AATATGGCAT GGTTGGCATT
AATGAAGGTA TTATCTCGAA TGCAGCAGCT CCCTTTGGTG GCGTAAAAGA ATCAGGCAGT
GGCCGTGAAG GCTCTAAATA TGGATTAGAT GATTACTTAG AAATTAAGTA TTTATGTATG
GGCGGCTTAA ATAAGTAG
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| Protein sequence | MHEIQDSQLI KTFSYIDGSW HSSESYFNVT NPATDEVLVK VCNAGIVETE LAVKAAKTAL
KSWSAKSANE RASLMRNWFN LMIQHQDDLA RILTLEQGKP FVEAKGEIAY GAAFVDWFAE
EGKRVYGDVI PGPSGDKRVI VVKQPVGVVA SITPWNFPNA MIARKAAAAL AAGCTFVVRP
ATQTPLSALA MAELAERAGI PAGVFNVVVG EDASGMGKVL TQHPDIAKFT FTGSTKIGKL
LIGQCATTVK KVSMELGGNA PFIVFDDADI DAAVEGAIAS KYRNAGQTCV CTNRIFVQNK
VLDLFTEKFS AAVAKLSLGN GLTDGVNIGP MISTTAVDGV NKLVADSVAQ GAKVLLGGQR
DSAGDNFYQA TILTNVSNDM PVARNEIFGP VSPIIAFDDE DQVIAMANDT EYGLAAYFYS
RDIGRVWRVA EGLEYGMVGI NEGIISNAAA PFGGVKESGS GREGSKYGLD DYLEIKYLCM
GGLNK
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