Gene Ping_1878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1878 
Symbol 
ID4624855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2282817 
End bp2283752 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content42% 
IMG OID639797051 
Productband 7 protein 
Protein accessionYP_943253 
Protein GI119945573 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.292524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0408488 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCT TATTTGAATA TATACTGAGA ATTGAAGTTT TAATCTTAAT CTTAGTATTG 
GTTATTCTAA AATCAACAAT CATTTTTGTA CCGCAAAACA GGGCTTACCT AATCGAACGT
TTTGGTAAAT ACCAATCGAC CCGGGAAGCC GGTTTAAATT TTATCCTCCC TTTCATTGAT
CGCATCGGAT CAGACCGTTC GCTTAAAGAG CAGGCGATCG ACGTGCCAAG TCAAAGTGCT
ATTACTAAAG ACAATATTTC CTTAAGTGTT GATGGCGTTC TTTATTTTAG AGTCTTGGAT
CCCTATAAGG CGAGTTACGG AGTTGATGAT TATTTATTCG CGGTCACTCA ATTAGCACAA
ACAACCATGC GTTCAGAATT GGGGAAAATG GAGCTGGATA AAACATTCGA AGAACGTGAT
GTGCTTAATA CTAATATTGT TGCAGCAATC AATGAAGCCG CTGGCCCCTG GGGTATTCAA
GTTTTACGCT ACGAAATCAA AGACATTGTG CCGCCACAAA GCATTATGGA AGCGATGGAA
GCGCAAATGA AAGCCGAGCG TGTAAAGCGA GCGCAAATAT TAGAGTCTGA AGGTGATAGA
CAGTCTGCGA TTAACGTGGC AGAAGGTCAG AAACAATCGG TGGTGCTACA GGCAGAAGCC
CAAAAAGAAG AGCAGATACT GCGTGCACAA GGTGAGGCCA ATGCAATTAT TGCAGTGGCA
GAAGCGCAGG CAGAAGCCTT AATCAAGGTA GGTGAAGCCG CCAATACTGA GCAGGGACAA
AAAGCGATTC AACTCGATTT AGCGACTAAA GCAATTGAAG CTAAGGCTGC TATTGCTAAA
GAATCATCAG TGGTATTGCT ACCCGATAGT GGTAATGATG CTGCCTCTAT TGTCGCACAG
GCGATGACCA TCATTAATAC GTTAAATAAA GGCTAA
 
Protein sequence
MDILFEYILR IEVLILILVL VILKSTIIFV PQNRAYLIER FGKYQSTREA GLNFILPFID 
RIGSDRSLKE QAIDVPSQSA ITKDNISLSV DGVLYFRVLD PYKASYGVDD YLFAVTQLAQ
TTMRSELGKM ELDKTFEERD VLNTNIVAAI NEAAGPWGIQ VLRYEIKDIV PPQSIMEAME
AQMKAERVKR AQILESEGDR QSAINVAEGQ KQSVVLQAEA QKEEQILRAQ GEANAIIAVA
EAQAEALIKV GEAANTEQGQ KAIQLDLATK AIEAKAAIAK ESSVVLLPDS GNDAASIVAQ
AMTIINTLNK G