Gene Ping_1871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1871 
Symbol 
ID4625254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2275166 
End bp2276695 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content44% 
IMG OID639797044 
Producthypothetical protein 
Protein accessionYP_943246 
Protein GI119945566 
COG category[S] Function unknown 
COG ID[COG3333] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.140236 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATG GAATTTTAGC TGGCTTATAT ACAGTTATGT TACCAACCAA CCTAATGATG 
GTCGTTATCG GCTGTTTTGT CGGCACTTTT ATCGGCATGT TACCTGGCCT GGGTCCTATT
TCAGCGATTG CCCTTATGAT CCCTATTACC TATGGTTTAG AGCCTTCATC GGGCATGATT
TTAATGGCAG GTGTTTATTA TGGTGCTGTC TTTGGCGGTT CAACCTCTTC AATATTAATT
AACGCACCGG GGTGCTCTTC AACCGTAGTC ACCGCCTTTG ATGGTTACCC TATGGCCCAA
AAAGGTCAGG CCGGTAAGGC CTTAGCACTC GCGGCATACG CTTCATTTAC CGGAGGCACC
TTATCAGCCA TTATGCTCTT AATCGCAGCA CCCGCGTTAG CCAAGGTTTC CTTGAGTTTT
CAGTCAACGG ATTATTTTGC CTTAATGCTG GTCGGATTAT CAGCGGTTGC CGCTTTTGCC
GGTAAGGGAC AAGTACTTAA AGCCTGGATG ATGACTATTT TAGGGTTAAT ACTGGCCACA
GTAGGTATTG ACAAAGGGAT AGGCGTACCG CGTTTTACCT TTGGCTTGAC TGACTTATTG
GATGGCTTTA GTTTTTTATT ACTGGCGATG GCGACCTTTG CACTGGGTGA AACCCTGATG
GGTATTTTAA AACCGGAGGA TAAATCAACA GAAGAGCAAA GCTCAATTAA AGACCTTGGC
AGTATGAAAG TGACCAAAGA AGAATTTAAA GAATTAGCAC CTGTTTCAAT TCGCTCTTCT
ATTCTTGGTT TTTTTGTTGG CGTACTTCCC GGTGCCGGCG CGACTATTGC TGCATTTTTA
AGTTACGGCT TGGAACGAAA TATTGCGCCC AAAGATAAAC GTGAAGAGTT TGGTAAAGGC
AGTATGCGTG GTTTAGTCGC GCCGGAATCT CCCAATAATG CAGCATCAAG CGGTTCATTT
GTGCCACTTT TAACCCTGGG TATTCCAGGA TCGGGGACTA CTGCGATTAT GTTAGGCGCA
CTGATCTCAT ACGGTGTACA ACCAGGCCCA AGACTTTACA TCGACAACCC TGAAATTTTC
TGGTCGGTTA TCATTTCCAT GTATGTCGGT AATATTGTTT TAATGGTGTT AAATTTACCT
TTGATTCCAT ATATATCCAA ATTGCTTGCC GTGCCAAGAA CCGTATTGTT ACCGATGATT
ATCTTCTTTT CGATAACGGG TGTCTATCTG GTTTCCTTTA ATACCATGGA CGTCTTTATT
ATGATTGCGG TTGCGATTGT TGCCATATTT CTGCGCCTGG CAAATTTCCC GCTGGCGCCT
TTATTATTAG GCTTTATTTT AGGGGGCTTA ATGGAAGAAA ATCTGCGCCG ATCCCTGATG
TTAAGTGACG GTCAATTAAG CTTTTTATGG GAACGTCCAA TCACCCTGGC TTTCACCGCG
ACGGCAGTAT TAGTGATTGT CACTCCGCTT CTGTTAATGG CCTTTAACAG ATATCGTAAT
CGCCCAATGA AAATGCAGGA GAATAACTAA
 
Protein sequence
MIDGILAGLY TVMLPTNLMM VVIGCFVGTF IGMLPGLGPI SAIALMIPIT YGLEPSSGMI 
LMAGVYYGAV FGGSTSSILI NAPGCSSTVV TAFDGYPMAQ KGQAGKALAL AAYASFTGGT
LSAIMLLIAA PALAKVSLSF QSTDYFALML VGLSAVAAFA GKGQVLKAWM MTILGLILAT
VGIDKGIGVP RFTFGLTDLL DGFSFLLLAM ATFALGETLM GILKPEDKST EEQSSIKDLG
SMKVTKEEFK ELAPVSIRSS ILGFFVGVLP GAGATIAAFL SYGLERNIAP KDKREEFGKG
SMRGLVAPES PNNAASSGSF VPLLTLGIPG SGTTAIMLGA LISYGVQPGP RLYIDNPEIF
WSVIISMYVG NIVLMVLNLP LIPYISKLLA VPRTVLLPMI IFFSITGVYL VSFNTMDVFI
MIAVAIVAIF LRLANFPLAP LLLGFILGGL MEENLRRSLM LSDGQLSFLW ERPITLAFTA
TAVLVIVTPL LLMAFNRYRN RPMKMQENN