Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1870 |
Symbol | |
ID | 4625253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 2274249 |
End bp | 2274962 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639797043 |
Product | transcriptional regulator |
Protein accession | YP_943245 |
Protein GI | 119945565 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.120377 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGACTTCTA CCTCACAAAT TGTAGACAAC GCGATGAATC AGAGCATAGA AATAAAAGAA CAAACAAAAT CAGAAAACTT AACTGAACAG CTGATTGAAG CTATCGTAAG TGGTGAATAT AGCCCTGGAA GCAAAATATC AGAAACGGAA CTTGCCCGTT TTTTTAATGT CAGTCGCGGT CCGCTTCGTG AAGCAATGAT GCGTATTGAG GCGCTTAATT TAGTTGAACG AATTCCCCAT GTAGGTACCC GGGTTGCCAC CTTAAGCCAG GAAAAATTAA TTGAAATTTA TGCGGTAAGA GAAGCGCTGG AAGGAATGGC TGCCAACCTT GCCTGCAAAC ATATTACCGA GCAGGAAATT GCAGGTTTAG AAATGTTATT AGAGCAGCAT CAAGAGCATA TTGAACAGGT GGACGGGGCT TCCTATTTTC ATCAACACGG TGATTTTGAT TTTCATTACC AAATTATTAA AGCCAGCCGC AATAGCAAAC TGATCACTTT ATTATGTAAT GAGTTATATC ACCTGCTGCG CATGTACCGT TACCAGTCAC CCAGTACGCA GTCACGCCCG ACACTCGCCC TTAACGAACA TTTTCATATA CTCACCGCAA TCAAAGAACG CGATGCTGAA CTTGCCGAAA TGTTAATGCG CCGGCATATC AAACGCAGCC GGGAATTAAT CGAAAACCAA CTGATAGAAG AAGGAAAAAA CTAA
|
Protein sequence | MTSTSQIVDN AMNQSIEIKE QTKSENLTEQ LIEAIVSGEY SPGSKISETE LARFFNVSRG PLREAMMRIE ALNLVERIPH VGTRVATLSQ EKLIEIYAVR EALEGMAANL ACKHITEQEI AGLEMLLEQH QEHIEQVDGA SYFHQHGDFD FHYQIIKASR NSKLITLLCN ELYHLLRMYR YQSPSTQSRP TLALNEHFHI LTAIKERDAE LAEMLMRRHI KRSRELIENQ LIEEGKN
|
| |