Gene Ping_1870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1870 
Symbol 
ID4625253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2274249 
End bp2274962 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content42% 
IMG OID639797043 
Producttranscriptional regulator 
Protein accessionYP_943245 
Protein GI119945565 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.120377 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACTTCTA CCTCACAAAT TGTAGACAAC GCGATGAATC AGAGCATAGA AATAAAAGAA 
CAAACAAAAT CAGAAAACTT AACTGAACAG CTGATTGAAG CTATCGTAAG TGGTGAATAT
AGCCCTGGAA GCAAAATATC AGAAACGGAA CTTGCCCGTT TTTTTAATGT CAGTCGCGGT
CCGCTTCGTG AAGCAATGAT GCGTATTGAG GCGCTTAATT TAGTTGAACG AATTCCCCAT
GTAGGTACCC GGGTTGCCAC CTTAAGCCAG GAAAAATTAA TTGAAATTTA TGCGGTAAGA
GAAGCGCTGG AAGGAATGGC TGCCAACCTT GCCTGCAAAC ATATTACCGA GCAGGAAATT
GCAGGTTTAG AAATGTTATT AGAGCAGCAT CAAGAGCATA TTGAACAGGT GGACGGGGCT
TCCTATTTTC ATCAACACGG TGATTTTGAT TTTCATTACC AAATTATTAA AGCCAGCCGC
AATAGCAAAC TGATCACTTT ATTATGTAAT GAGTTATATC ACCTGCTGCG CATGTACCGT
TACCAGTCAC CCAGTACGCA GTCACGCCCG ACACTCGCCC TTAACGAACA TTTTCATATA
CTCACCGCAA TCAAAGAACG CGATGCTGAA CTTGCCGAAA TGTTAATGCG CCGGCATATC
AAACGCAGCC GGGAATTAAT CGAAAACCAA CTGATAGAAG AAGGAAAAAA CTAA
 
Protein sequence
MTSTSQIVDN AMNQSIEIKE QTKSENLTEQ LIEAIVSGEY SPGSKISETE LARFFNVSRG 
PLREAMMRIE ALNLVERIPH VGTRVATLSQ EKLIEIYAVR EALEGMAANL ACKHITEQEI
AGLEMLLEQH QEHIEQVDGA SYFHQHGDFD FHYQIIKASR NSKLITLLCN ELYHLLRMYR
YQSPSTQSRP TLALNEHFHI LTAIKERDAE LAEMLMRRHI KRSRELIENQ LIEEGKN