| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1869 |
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| Symbol | prpB |
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| ID | 4625252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 2273111 |
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| End bp | 2273989 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639797042 |
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| Product | 2-methylisocitrate lyase |
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| Protein accession | YP_943244 |
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| Protein GI | 119945564 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
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| TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.127999 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCAG GTAAAAAATT CAGACAAGCA CTTATCAATA ATAAACCGCT GCAGATAGTT
GGCACCATCA ATCCTTACTG CGCCATGATG GCAGAGCAAC TTGGTCATCA GGCCATTTAT
CTGTCTGGTG GAGGTGTCGC CAATGCTTCT TATGGTTTAC CTGATTTGGG CATGACCTCA
TTAAACGATG TTATTGCTGA TGTGCAGCGT ATTACATCCG CATCTGCTTT ACCTTTACTG
GTTGATATCG ATACCGGATG GGGAGGCGCT TTTAATATTG CTAAAACTGT TCGCGATATG
GAAAAAGCCG GCGCGGCAGC TGTACATATT GAAGATCAAG TGTCCCAAAA ACGTTGCGGT
CACCGCCCTA ATAAAGAGAT TGTTTCCACA CAGGAAATGG CAGATCGCAT CAAGGCTGCA
GTGGATGCAC GTATCGACAG CGACTTTTTT ATTATGGCAC GCACCGACTC CTTCGCCCAG
GAAGGCTTAG AATCTGCCAT TGCACGCGCA CAAGCCTATG TTGCAGCCGG CGCTGATGGT
ATTTTTGCTG AAGCCATCAA AACGGAAGCG CACTACCGTG CATTTTCGAG AGCCTTGAAT
GTGCCTATTC TTGCCAATAT CACAGAATTT GGTGAAACCG AATTATGGAA TAAAAAACAA
CTCGGCGAAT GGGGCTGCGC AATGGTGCTC TATCCTCTTT CCGCTTTCAG AGCCATGAAT
AAAGCCGCTG AATCAGTTTA TAAAACCATA CTTGTCGATG GTGATCAAAA AGCAGTGGTC
GATACGATGC AGACACGAAT GGAGCTATAC AAATACCTCG GCTACCACGA TTACGAGCAA
AAACTTGACG AATTATTTGC CGATCAAAAA AACAAGTAA
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| Protein sequence | MTPGKKFRQA LINNKPLQIV GTINPYCAMM AEQLGHQAIY LSGGGVANAS YGLPDLGMTS
LNDVIADVQR ITSASALPLL VDIDTGWGGA FNIAKTVRDM EKAGAAAVHI EDQVSQKRCG
HRPNKEIVST QEMADRIKAA VDARIDSDFF IMARTDSFAQ EGLESAIARA QAYVAAGADG
IFAEAIKTEA HYRAFSRALN VPILANITEF GETELWNKKQ LGEWGCAMVL YPLSAFRAMN
KAAESVYKTI LVDGDQKAVV DTMQTRMELY KYLGYHDYEQ KLDELFADQK NK
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