| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1868 |
|---|
| Symbol | |
|---|
| ID | 4625251 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 2271922 |
|---|
| End bp | 2273052 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639797041 |
|---|
| Product | 2-methylcitrate synthase/citrate synthase II |
|---|
| Protein accession | YP_943243 |
|---|
| Protein GI | 119945563 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0372] Citrate synthase |
|---|
| TIGRFAM ID | [TIGR01800] 2-methylcitrate synthase/citrate synthase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.650369 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.135048 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATA AAAAAGCGGG CGGTGCAGGT CTTCGTGGAC AAAGCGCAGG TGAAACAACA
TTATGTACTG TTGGGCAATC CGGTAGTGGC TTAACCTATT GTGGTTACGA TATTGCAGAT
CTTGCAGAGA ATGTTACTTT TGAAGAAGTT GCTTATTTGT TATTTAATGG CGAATTACCG
ACGCAGCAAC AGCTTGATAG TTATAAAACA GAGCTCAATA CGCTGCGTGA TTTACCGCAA
GCTTTAAAGG AAGTGTTAAA GCTTATTCCT GCCAATTCAC ACCCGATGGA TGTGATGAGA
ACAGGTTGTT CTTTTTTAGG CAATCTTGAA CCTGAGGCTG ATTTTTCCGA GCAAAAGCGG
GCTTCAAACA GATTGCTGGC AGCATTTCCT GCGATCATGT GCTACTGGTA CAGATATTCT
CACGATGGTG TTGAAATCGA TTGTCAGACC GATCAGCCGA CACTTGGCGG ACACTTTCTG
AAATTATTAA AGGGTGAAAC AGCCTCGTTA CAACATCAGC GCGTAATGGA TGTATCATTA
ATTTTATATG CAGAGCATGA GTTTAATGCC TCTACCTTTA CGGCGCGTGT TTGTGCATCA
ACGTTATCAG ATATGTTCTC CTGTACCACA GGTGCCATTG GTACCCTGCG TGGTCCATTA
CATGGCGGTG CAAATGAAGC AGCCATGGAT ATGATTGAAA AATTCACTTC ACCGGAAGAT
GCTAAAGAGA AAATGGGATT AATGCTGGAA CGCAAAGAAA AAATCATGGG CTTTGGTCAT
GCTATCTACA AAACCTCTGA TCCGCGTAAC ATTATTATTA AAAAATGGTC AGAAAAACTG
GCAAAAGAAA ATGGTGACAC TTCTTTATAT GATATCTCGG TTGCCTGTGA AGAATTTATG
TGGGATACCA AAAAATTATT TTGTAATGCC GATTTCTTCC ATGCTTCAAC CTATAACTAC
ATGGGTATTC CAACTAAACT GTTTACGCCA ATTTTTGTCT GTTCACGCTT AACCGGTTGG
GCTGCACATG TGATGGAACA ACGTGCCAAT AACCGTATTA TTCGCCCAAG TGCAGATTAT
ACCGGTAGCG CACCGCGTAA GGTCATCGCC ATCGCTGAAC GTGAAGCATA A
|
|---|
| Protein sequence | MSNKKAGGAG LRGQSAGETT LCTVGQSGSG LTYCGYDIAD LAENVTFEEV AYLLFNGELP
TQQQLDSYKT ELNTLRDLPQ ALKEVLKLIP ANSHPMDVMR TGCSFLGNLE PEADFSEQKR
ASNRLLAAFP AIMCYWYRYS HDGVEIDCQT DQPTLGGHFL KLLKGETASL QHQRVMDVSL
ILYAEHEFNA STFTARVCAS TLSDMFSCTT GAIGTLRGPL HGGANEAAMD MIEKFTSPED
AKEKMGLMLE RKEKIMGFGH AIYKTSDPRN IIIKKWSEKL AKENGDTSLY DISVACEEFM
WDTKKLFCNA DFFHASTYNY MGIPTKLFTP IFVCSRLTGW AAHVMEQRAN NRIIRPSADY
TGSAPRKVIA IAEREA
|
|---|
| |