| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1864 |
|---|
| Symbol | |
|---|
| ID | 4625247 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 2265432 |
|---|
| End bp | 2266124 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639797037 |
|---|
| Product | response regulator receiver/unknown domain-containing protein |
|---|
| Protein accession | YP_943239 |
|---|
| Protein GI | 119945559 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG4565] Response regulator of citrate/malate metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.134891 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.12527 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAATG ATCAAAATGT GAAAGTGTTA ATCATTGAAG ATGATTTGGG TATAGCCGAA
ATTCATCGTC GTAATTTGAT GAAAATAGAG GGGTTTGATG CGATCGGCAT TGCAACGAGT
AAAAATGAGG CGGAAACATT ATTAGATGTT TTAGCCCCGG ACTTGGTCTT ACTGGATCTC
TATCTCCCCG ATGGAAATGG ACTCGATATT TTAAGGTATC TTCGCCAGCA GGAGCATGCC
TGCGATGTGA TTTTAATTAC AGCGGACAGA GAAGTTGAAA CATTGCAGCA GGCGATGCGC
GGTGGGGTGG TTGATTACCT GCTTAAACCC GTGGTCTTTT CGCGTCTGCA GGAAGCGCTG
CATAAATATT TAAAACAAAA AAACAAGCTT GGCAGCATAG ATGATTTAGA TCAGAGTATG
GTTGATTCAA TGATTTTTAA TGCCTTCACC GGCACCACTC AGGGAGGGCA TCTGCCTAAA
GGTATCGATA AAATGACGCT GGATAAAGTG CGGGTGTTGT TTGATCAACA TGCACAGATA
ACAGCAGATA AATCGGGAGA GCTTATTGGA GCAAGCCGCA CTACGGCAAG AAGGTATCTG
GAGCACCTTA TTAGCGCCGG TGAATTACAG GCGGATTTAC ACTACGGTAC GGTCGGCAGA
CCGGAAAGGA CTTATAAAAA AACACGTGGC TGA
|
|---|
| Protein sequence | MLNDQNVKVL IIEDDLGIAE IHRRNLMKIE GFDAIGIATS KNEAETLLDV LAPDLVLLDL
YLPDGNGLDI LRYLRQQEHA CDVILITADR EVETLQQAMR GGVVDYLLKP VVFSRLQEAL
HKYLKQKNKL GSIDDLDQSM VDSMIFNAFT GTTQGGHLPK GIDKMTLDKV RVLFDQHAQI
TADKSGELIG ASRTTARRYL EHLISAGELQ ADLHYGTVGR PERTYKKTRG
|
|---|
| |