Gene Ping_1857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1857 
Symbol 
ID4625240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2255913 
End bp2258342 
Gene Length2430 bp 
Protein Length809 aa 
Translation table11 
GC content44% 
IMG OID639797031 
ProductDNA polymerase II 
Protein accessionYP_943233 
Protein GI119945553 
COG category[L] Replication, recombination and repair 
COG ID[COG0417] DNA polymerase elongation subunit (family B) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.885669 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.10624 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGGAT CACAGCGGCA TCAAATTGCA GGGTTAATTC TCACCCGCCG GCAACATGAA 
ACGCCGCAAG GCGTGGAGTT GGAGCTGTGG CTTGCGACGA AAGAGGGGCC CTGCCGGGTG
TTCTTACCTG CACAACGTTA TGTGTTTCTT ATTCACCAGC AACAGCTTGT TAAGGCGCAG
GCACTATGGT CAGCGGTGCA TTTGACCCCT AATGAAATTC GTCCTCTCTC TTTGACCTCT
TTTAACGGAT TATCGGTTAG CGCTATTTAT TGCCTTAATA ACAAAATGTT CAGACAACTT
CAGGATATTT TAACCACTGC GTCCATTCCG ATTTTTGAAG CCGATATTAA GGTCTGTGAC
CGTTATCTGA TGGAGCGTTT TATCTATGGC ACTGTCTCTG TGCAGGGGGA ATGCCATTGG
CAAGGGCATT ACTGGCACTG CCGGGCCGCA AAAATTTCAC CTGCCACAGT AACATCCAAG
CTTAAACAGG TCTCATTGGA TATTGAATGC AGCCCCTTGG GGGAACTTTA TTCGGTTGGG
CTTAGCTACG GCAATACTGA CTCTGATAAG GGAAGCGCAT TGTTGGACAG CGATTGCTGC
GCAACGGTAC TGATGATTGG GGAACATGAA CCCTGTGATG ATATTAATAT TCAATGGGTT
GCAAATGAAC AAGCCTTATT GTGCGCATTA GAAGCTTGGT TTCAATGGCA TGACCCGGAT
GCGGTTATTG GCTGGGCAGT TACAAACTTT GATCTGCGCC TATTAGTCAA ACGGGCTGAT
GCACACAATA TGCCCTTAAG ACTTGGGCGA GACGGCTCAG CATTACGCTG GTTACCACAC
CGTCAAGCTC CAGATCAAGG CACGGTTATT TTAAATGGCA GAGTGGTCTT AGAGGGTATT
GATCAACTTA AAAATGCGGG CTGGATGTTT GAAAGTTTTA GTCTGGAATT TGTCAGTCAA
GCGATGTTAT CTGCAGGAAA ACTGCTTACT AATCCGCATA ACTACAATCA TAACAAGGGC
TTGGAGATAA AACGTCAATT TGAGCAGGAG CCTGTCTCAC TGGCGCGTTA TAATCTGCAG
GACTGTTTGC TGGTGGAACG CATATTTGCC AAGGCACAAT TAACGGAATA TGCAATACAA
CGTGCCCGAT TAACCGGTTT AGCACTGGAT CGCAGGGGCG CATCGGTTGC GGCCTTTACT
AATCTTTACC TGCCGTTATT ACATCGTAGT GGTTATATCG CACCTAATAT TGGTGATATT
GAAGCACAAC ATTCACCCGG TGGCTTTGTT ATGGATTCAA TACCGGGTCT TTATGATTGG
GTATTAGTGC TGGATTTTAA ATCATTATAC CCCTCTATTA TTCGCAGCTT TAAAATTGAT
CCGATGGGCA TGATTGAAGG GCTTAAAGAA AATGAAAAAA ATGCTATTCC TGGCTTTAGA
GGGGCAAGAT TTAGCCGTAA TAAACACCAT TTACCGGATA TTCTGGACAA GCTCACCGCG
GCAAGGGAGT CAGCTAAAAA AGAAAATAAT CAACCCTTTC AACATGCGAT TAAAATCATT
ATGAACAGTA TGTATGGGGT ACTAGGATCC GCGGGTTGCC GTTTTCACGA TACCCGTCTA
GCCAGTTCAA TTACCCTGCG CGGCCATCAA ATTATGCTGG AAACGCGCGA TTTTATTGAA
CAACAGGGCG AGCAGGTGGT TTACGGGGAT ACTGATTCAA CCTTTGTTTG GTTAAAGCAC
TGCACTAATG CCATTGATGC ACAAGCGCGG GGAAAAGTGC TTGAAAAACG CATTAACCAA
TATTGGTCGA ATAAACTGAA CTTGGAATTC CAATTAGATT GTTTTCTGGA AATTGAATTT
GAAACCTGTT TCAGGAAATT TTTTATGCCG ACATTACGGG GATCTGAGAC CGGCTCTAAA
AAACGTTATG CTGGACTAAA AGTGACCAAT GACGGTGAGT TAATGCTATT TAAAGGGTTA
GAAACGGTGC GTTCGGATTG GACCGAACTT GCTCAGGATT TTCAGAAAAA GTTGTATGCT
AAAGTGTTTG CCAATGAGCC GATAGATAGC TTGGTAATTG ATACGGTTGA GTTGTTAAAT
AAGGGAGAGC TTGATCAGCA GTTAATTTAT CACAAGCGCC TGGGGCGTCC TTTGAATGCG
TATCTTAAAA ATGTGCCTCC GCAGGTACGG GCTGCACGTT TGGCCGATCA GATTAATGCA
AATTTAGGCC GTCCACTGCA ATACCAGCGT TCAGGCCGGA TTGCTTATCT GATCACTGTC
AATGGACCCG AGCCTGCAGA TTATCGGCAA TCCTGCATTG ATTATCAGCA CTATATAGAT
AAGCAGCTTA AACCGATAGC GGAAGCTATT CTACCTTTGC TTAGCAAAAA CTTTGATGAC
ATGATCTCAG ATCAAATGCG TTTGTTTTAA
 
Protein sequence
MSGSQRHQIA GLILTRRQHE TPQGVELELW LATKEGPCRV FLPAQRYVFL IHQQQLVKAQ 
ALWSAVHLTP NEIRPLSLTS FNGLSVSAIY CLNNKMFRQL QDILTTASIP IFEADIKVCD
RYLMERFIYG TVSVQGECHW QGHYWHCRAA KISPATVTSK LKQVSLDIEC SPLGELYSVG
LSYGNTDSDK GSALLDSDCC ATVLMIGEHE PCDDINIQWV ANEQALLCAL EAWFQWHDPD
AVIGWAVTNF DLRLLVKRAD AHNMPLRLGR DGSALRWLPH RQAPDQGTVI LNGRVVLEGI
DQLKNAGWMF ESFSLEFVSQ AMLSAGKLLT NPHNYNHNKG LEIKRQFEQE PVSLARYNLQ
DCLLVERIFA KAQLTEYAIQ RARLTGLALD RRGASVAAFT NLYLPLLHRS GYIAPNIGDI
EAQHSPGGFV MDSIPGLYDW VLVLDFKSLY PSIIRSFKID PMGMIEGLKE NEKNAIPGFR
GARFSRNKHH LPDILDKLTA ARESAKKENN QPFQHAIKII MNSMYGVLGS AGCRFHDTRL
ASSITLRGHQ IMLETRDFIE QQGEQVVYGD TDSTFVWLKH CTNAIDAQAR GKVLEKRINQ
YWSNKLNLEF QLDCFLEIEF ETCFRKFFMP TLRGSETGSK KRYAGLKVTN DGELMLFKGL
ETVRSDWTEL AQDFQKKLYA KVFANEPIDS LVIDTVELLN KGELDQQLIY HKRLGRPLNA
YLKNVPPQVR AARLADQINA NLGRPLQYQR SGRIAYLITV NGPEPADYRQ SCIDYQHYID
KQLKPIAEAI LPLLSKNFDD MISDQMRLF