Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1853 |
Symbol | tdh |
ID | 4625040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 2252697 |
End bp | 2253731 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639797027 |
Product | L-threonine 3-dehydrogenase |
Protein accession | YP_943229 |
Protein GI | 119945549 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
TIGRFAM ID | [TIGR00692] L-threonine 3-dehydrogenase [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.981388 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0441816 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATAA AAGCGCTAGC AAAATTAAAA CCAGAAGTGG GCATTTGGAT GACCACAGTC GATAAGCCTG AGCCCGGGCA TAATGATTTG TTGATTAAAA TCCATAAAAC AGCCATTTGT GGTACCGATA TCCATATTTA TAACTGGGAT GAATGGTCAC AAAATACGAT TCCTGTTCCA ATGGTTGTCG GCCATGAATA TGTCGGTGAA GTAGTTGGAA TGGGCCAGGA GGTTCGCGGA TTTAGCGTTG GTGACAGGGT ATCGGGCGAA GGCCATATTA CCTGCGGACA TTGTCGTAAC TGCCGGGCAG GGCGGACGCA TCTTTGCCGT AATACTATTG GTGTGGGGGT TAATCGCACG GGTGCATTTG CAGAGTATTT AGTTATTCCG GCTTTTAATG CCTTTAAAAT ACCCGCAGGT ATTTCCGATG ATTTAGCATC TATCTTTGAC CCCTTTGGTA ATGCAGTGCA CAGCGCTTTA TCCTTTGATG TTGTTGGTGA AGACGTGCTT ATTACCGGTG CCGGCCCTAT TGGTATTATG GCGGCTGCAG TTGCGAAACA TGCTGGTGCG CGTTATGTGG TGATAACGGA TATTAATGAA TATCGATTAG ATCTGGCCAG AAAAATGGGC GTGACCCGCG CGGTTAATGT CGCCCAGCAA AAACTCGAAG ATGTTATAGC ACAACTGGGC ATGACGGAAG GTTTTGATGT TGGACTCGAG ATGTCCGGTG CGCCCGTCGC CTTTAATAGT ATGCTTAAAA ATATGAGCCA CGGCGGTAAG ATTGCACTGT TAGGTATTCC ACCTTCTGAT ATGTCCATTG ATTGGAATAT GGTTATTTTT AAAGGGCTGG TTATTAAAGG AATTTATGGC CGGGAGATGT TTGAAACCTG GTATAAAATG GCCAGTTTAA TACAATCCGG TTTAGATTTG GATCCCATTA TAACTCATAC TTTCCCCGTG GATAAATTCC AGGAGGGCTT TGATATGATG CGTTCGGGTA AATCGGGAAA AGTCATACTG GACTGGTCTA TTTAG
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Protein sequence | MKIKALAKLK PEVGIWMTTV DKPEPGHNDL LIKIHKTAIC GTDIHIYNWD EWSQNTIPVP MVVGHEYVGE VVGMGQEVRG FSVGDRVSGE GHITCGHCRN CRAGRTHLCR NTIGVGVNRT GAFAEYLVIP AFNAFKIPAG ISDDLASIFD PFGNAVHSAL SFDVVGEDVL ITGAGPIGIM AAAVAKHAGA RYVVITDINE YRLDLARKMG VTRAVNVAQQ KLEDVIAQLG MTEGFDVGLE MSGAPVAFNS MLKNMSHGGK IALLGIPPSD MSIDWNMVIF KGLVIKGIYG REMFETWYKM ASLIQSGLDL DPIITHTFPV DKFQEGFDMM RSGKSGKVIL DWSI
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