| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1852 |
|---|
| Symbol | |
|---|
| ID | 4625039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 2251491 |
|---|
| End bp | 2252684 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639797026 |
|---|
| Product | 2-amino-3-ketobutyrate coenzyme A ligase |
|---|
| Protein accession | YP_943228 |
|---|
| Protein GI | 119945548 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
|---|
| TIGRFAM ID | [TIGR00858] 8-amino-7-oxononanoate synthase
[TIGR01822] 2-amino-3-ketobutyrate coenzyme A ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.14136 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAATA AATTCTATCA ACAAATCAAT CAACAAATCG AACAAGTCAA AAATGATGGC
CTTTATAAAT CAGAGCGAAT TATTACATCA GCTCAACAAG CCTTAGTATC AATAGCAAGT
GGTGAGCAGG TGCTTAATTT TTGTGCCAAT AACTATCTTG GTTTAGCAAA CCATCCTGAG
TTGATTGCAG CTGCTAAAAA AGGGCTGGAT CAACAAGGTT TTGGTATGGC CTCCGTACGT
TTTATTTGCG GTACTCAAGA CAAGCATAAA GCTTTGGAAG CCAAGCTCTC TGGCTTTTTA
GGCATGGAAG ATACGATTCT TTATACTTCC TGTTTTGACG CTAATACCGG TTTATTTGAA
ACTATTTTGA ATGCCGATGA TGCCATTATT TCAGATGCGT TAAATCATGC TTCTATTATA
GATGGTGTAC GTTTATGCAA AGCTAAACGT TTCCGTTATG CAAATAATAA TATGGCTGAA
TTAGAAGAGC AGTTAATCGC CGCAGAAAAA GCCGGTGCGC GCAATACATT GATTGTGACC
GATGGTGTCT TTTCAATGGA TGGGGTAGTC GCCAATTTAC CAGCCATTTG TGATTTGGCT
GATAAATATG ATGCATTGGT GATGGTTGAT GATTCTCATG CTGTTGGTTT TATGGGTGCC
AATGGTCGTG GTACCCATGA ATATCATAAT GTAATGGGGC GTATTGATAT TATTACCGGC
ACCTTAGGTA AAGCTATGGG GGGCGCATCC GGTGGTTATA CAGCGGGCAA AAAAGAAGTG
ATTGATTGGT TACGCCAACG CTCGCGTCCT TATCTTTTTT CAAACTCGCT TGCCCCTGCG
ATTGTTGCAG CTTCCATTGA GGTGCTCGAC TTATTGGCTA AAAGTCACGC GCTGCGTGAA
AAACTTTGGG AAAACTCTGC GCACTTTCGT CGCCGCATGA CTGAAGCGGG TTTTACCATG
GGTGGCAGTG ACCATGCTAT TATTCCTATT ATGTTGGGGG ATGCAAAAAT AGCCGCCGAG
TTTGCGGAAA GAGCCCTGTT GAAAAAAGTT TATGTGGTGG CTTTCTCGTT TCCTGTTGTA
CCAAAAGATC AGGCACGTAT CCGTACGCAA ATGTCTGCCG CACATACAAC TAAGCAGCTT
GATTATGCGA TTGATGTCTT TATTGAAGTT GGTAAAGAGA TGGGCTTAAT TTAA
|
|---|
| Protein sequence | MSNKFYQQIN QQIEQVKNDG LYKSERIITS AQQALVSIAS GEQVLNFCAN NYLGLANHPE
LIAAAKKGLD QQGFGMASVR FICGTQDKHK ALEAKLSGFL GMEDTILYTS CFDANTGLFE
TILNADDAII SDALNHASII DGVRLCKAKR FRYANNNMAE LEEQLIAAEK AGARNTLIVT
DGVFSMDGVV ANLPAICDLA DKYDALVMVD DSHAVGFMGA NGRGTHEYHN VMGRIDIITG
TLGKAMGGAS GGYTAGKKEV IDWLRQRSRP YLFSNSLAPA IVAASIEVLD LLAKSHALRE
KLWENSAHFR RRMTEAGFTM GGSDHAIIPI MLGDAKIAAE FAERALLKKV YVVAFSFPVV
PKDQARIRTQ MSAAHTTKQL DYAIDVFIEV GKEMGLI
|
|---|
| |