Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1841 |
Symbol | |
ID | 4626136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 2237056 |
End bp | 2238852 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639797015 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_943217 |
Protein GI | 119945537 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.142292 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.143257 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAGG ACGTAGAATA CGACAGTAAA CTTAATGATA GAAAACGCCA TCAGGCAGAC CTTACTCTTT CCAACAATGC GCTTGCCATT GCCAACAAGG ATCTTGCCTT TCAAAATGAA GAGAAGGATA AACGGGCAGC AGAGCTTGCC ATTGCCAACG AAGAAAAAAG TAAACGGGCA GCAGAGCTTG CCATTGCTAA CAAAGAGCTT GCCTTTCAAA ATAAAGAGAA GGATAAACGG GCAGCAGAGC TTGCCATTGC TAACAAAGAG CTTGCCTTTC AAAATAAAGA GAAGGATAAA CGGGCAGCAG AGCTTGCCTT TCAAAATAAA GAGAAGGATA AACGGGCAGC AGAGCTTGCC ATTGCTAACA AAGAGCTTGC CTTTCAAAAT AAAGAGAAAG ATAAACGGGC AGCAGAGCTG GCCATTGCCA ACAAGGAGCT TGCCATTGCC AACGAAGAGA AAGGCAAACT GACAGAAAAA CTCAATGACC TCGCCTTCTA TGACACGCTT ACCGGCTTGC CCAACAGACG TATTTTGATA GACAGGCTAC ATCACGCGTT AGCTTCCAAT GTGCGTGAAG GCTGTGATAG TGCGGTGATG TTTGTTGATT TGGATCATTT CAAGGATATC AACGATACCC TCGGCCATGG ATTCGGTGAT TTACTGCTGA TCCAGATAGC GCAGCGTCTG GCGTCTTGCC TACGCAAAGG TGATACGGTG GCGCGTCTGG GAGGGGACGA GTTTGTGTTG ATTCTGGAAA ATCTGGACAA AAAAACCATT GAAGCCGCAG CAAAGGCGAA TGCCATTGCC GATAAAATTT TGGCTGCGCT TAATAAGCCC TACCAGCTTG ACATGCACAA ATGCTACAGC ACTGTCAGTA TCGGAGCTGT CTTTTTTGAC CATCAGGGTA ATACGGCAGA AGATCTGCTG AAACAAGCCG ACATTGCTAT GTATCAGGCC AAACAAGCCG GCGGCAATCA GATCAGGTTC TTTAACCCGG AAATGCAGGA AATTATTAAT GTGCGCATCA CCCTCGAAAA TGAACTGCGC CTTGCCATTG AAAAATCGCA ATTTCATTTG TATTACCAAA TTCAGATGGA CAGTGCCAAC CGAGTATTGG GAGCCGAGGC ATTGATCCGC TGGATGCACC CTGAACGTGG ACTAGTGTTA CCTGCTACCT TTATTCCTTT AGCGGAAGAA ACCGGCTTAA TTCTACCTAT TGGGAAATGG GTTATCGAGA CGGCTTGTGC GCAGATAAAA GTATGGCAGA AAGAGCCCCT GACCCGCAAC TTAACACTGT CAGTCAATGT GAGTGCCAAA CAATTCCGGC AGAAGAATTT TGTGGAAAAA GTGCAGTCAG CTGTAGAGCG ATATGCTGTT CCCGGAAATT TACTTAAGCT GGAATTGACC GAAAGCCTGT TGCAATACGA TATCGAAGTC ACCATTGCCA TGATGAAGGC ATTAAATAAG ATTGGTGTTC AGTTTTCCCT GGATGACTTC GGCACAGGTT ATTCATCCTT ACAATACCTT AAGCGGCTGC CCCTCGATCA GTTCAAGATA GACCAATCGT TCGTGCGTGA TATTGCGACA GATAATAACG ATAAAGCGAT AGTAAAAGCG ATTGTTGCTA TGGCACAGAT TCTGGATATA GACGTTATTG CCGAGGGAGT GGAAACTGAA GAGCAACGAC AATTACTCTT AGGCAAAGGA TGCGTCTTTT TCCAAGGGTA TTTATTCAGC AAACCAATAC CAATTGATGA ATTTGAGGCG TTAATTTGTC GTTTAACTGA CACCTGA
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Protein sequence | MSKDVEYDSK LNDRKRHQAD LTLSNNALAI ANKDLAFQNE EKDKRAAELA IANEEKSKRA AELAIANKEL AFQNKEKDKR AAELAIANKE LAFQNKEKDK RAAELAFQNK EKDKRAAELA IANKELAFQN KEKDKRAAEL AIANKELAIA NEEKGKLTEK LNDLAFYDTL TGLPNRRILI DRLHHALASN VREGCDSAVM FVDLDHFKDI NDTLGHGFGD LLLIQIAQRL ASCLRKGDTV ARLGGDEFVL ILENLDKKTI EAAAKANAIA DKILAALNKP YQLDMHKCYS TVSIGAVFFD HQGNTAEDLL KQADIAMYQA KQAGGNQIRF FNPEMQEIIN VRITLENELR LAIEKSQFHL YYQIQMDSAN RVLGAEALIR WMHPERGLVL PATFIPLAEE TGLILPIGKW VIETACAQIK VWQKEPLTRN LTLSVNVSAK QFRQKNFVEK VQSAVERYAV PGNLLKLELT ESLLQYDIEV TIAMMKALNK IGVQFSLDDF GTGYSSLQYL KRLPLDQFKI DQSFVRDIAT DNNDKAIVKA IVAMAQILDI DVIAEGVETE EQRQLLLGKG CVFFQGYLFS KPIPIDEFEA LICRLTDT
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