| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1837 |
|---|
| Symbol | |
|---|
| ID | 4626132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 2229316 |
|---|
| End bp | 2230425 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639797011 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_943213 |
|---|
| Protein GI | 119945533 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
|---|
| TIGRFAM ID | [TIGR03169] pyridine nucleotide-disulfide oxidoreductase family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.240705 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGTC TTGTTTTGAT TGGAGGGGGG CATGCACACA TGATAACCCT GAGTAAATTA
GATACCTTTA TATCTAAAGG GTATCAGGTA ACCGTCATTC AACCAGCTGA CTATCACTAC
TATAGTGGCA TGGGACCTGG AATGCTGGGT GGTACATACG AGCCTGATGA TATCCGTTTT
GCGACTAAAA TACTGGTTGA AAGTAAGGGC GGCAGATTTG TCAAAGCACA TGCTAGCCGA
ATCGACCCCG AAAAACGAGT TGTGCATCTG CAGGAAAGTG ATGAGAAGAT TAAATATGAT
GTTCTCTCTT GTAATGCGGG ATCTTATGTC CCGAAAAATA TTGTTGAAGG GGATAGCGAT
AACGTTTTTA CGGCGAAGCC TATTGAAGAA CTAAGCCGAG CCAAAGAGAC TATTCTTAAG
AAGTTAAGGG ATGGCCCTAT TTCAATAGCT GTTCTTGGCG GGGGACCTGC TGCCATTGAG
ATAGCTGGGA ATATTCATCA ATTATGTAAA CAAAAAGCAT TACACCAACC GCATATACGG
CTTTTTAGTG GGCATGGATT AATGTCCAAA GTGTCCCCTA GAGTACGAAA GCTTCTCCGT
AAGTTGCTGG TTCGTAAAGG CATTGAAATA ATAGAAAAAG GTTATGTTGA AAAAGTTGCC
AATGGCAAGA TTACCCTAGA AAATGATACG ACCTATACTG CTGATATTAT CTTTCCGGCG
ATAGGTGTTA AGCCGTCGAC AATTTTTTCC CGATCAGGCC TGGATATTGG TCCTGAGGGC
GGTTTAAAAG TGAATTCATT TTTACAATCG ACCAGTCACA CCCCTATTTT TGGAGGCGGT
GATTGTATCT ATTATGCTGA TCAACCACTT AATAAAGTGG GTGTTTATGC AGTGCGTCAA
AACTTAGTTT TATATCATAA TTTAATGGCT GCACTTGAGG AAAGACCGTT AGAAATTTTT
TCGCCTGGTG GTGATTACCT GTTGATTTAT AATCTTGGAG ATGGCGAAGG GGTGTTCTCC
AAATGGTTCC TTACATTCTC AGGTAAAATG GCTTTTATGA TTAAAGATCA CATCGACAGA
AAATTTATAA AACTATTCCA AGTTTTGTAA
|
|---|
| Protein sequence | MKSLVLIGGG HAHMITLSKL DTFISKGYQV TVIQPADYHY YSGMGPGMLG GTYEPDDIRF
ATKILVESKG GRFVKAHASR IDPEKRVVHL QESDEKIKYD VLSCNAGSYV PKNIVEGDSD
NVFTAKPIEE LSRAKETILK KLRDGPISIA VLGGGPAAIE IAGNIHQLCK QKALHQPHIR
LFSGHGLMSK VSPRVRKLLR KLLVRKGIEI IEKGYVEKVA NGKITLENDT TYTADIIFPA
IGVKPSTIFS RSGLDIGPEG GLKVNSFLQS TSHTPIFGGG DCIYYADQPL NKVGVYAVRQ
NLVLYHNLMA ALEERPLEIF SPGGDYLLIY NLGDGEGVFS KWFLTFSGKM AFMIKDHIDR
KFIKLFQVL
|
|---|
| |