Gene Ping_1830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1830 
Symbol 
ID4626125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2218707 
End bp2220005 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content46% 
IMG OID639797004 
Productcytochrome c, class I 
Protein accessionYP_943206 
Protein GI119945526 
COG category[C] Energy production and conversion 
COG ID[COG2010] Cytochrome c, mono- and diheme variants 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.550626 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAAAC GTATCGTTTA TGGCGTATGT GGTGCAGCTA TTGTAGGATT ATGTGTATTT 
AGTATATACG CTTGGTACCC TGCAATAGAT CCCGTCATAC CTGCTCAAAC AGACTATTCT
CCAGAGATTA TCGAACAAGG TAGAGTCCTT GCCGCAGCAG GTTATTGCAG CACTTGTCAC
ACGCCATCAG GTGGAACGCC TTATGCAGGT AACTATGAAA TGCACACCGA CTTTGGCACC
ATTTATTCGA GTAACATCAC CCCAGATGTC GAAACCGGTA TTGGTAACTG GTCAGAAGCC
GCTTTTAGCC GAGCGATGCG CATTGGTGTG AGTCGTGATG GACATCATTT ATTACCTGCG
TTCCCTTATG AACACTTTAA TAAAATGACC GACGCGGATA TTAACGCCAT TTATGCTTAT
ATCATGACGT CTGTACCGGC CGTTAACCAA GTCAAAAAAG ATAACGATAT TCCGTTTCCG
CTCAATATCC GCTGGTTTCA AGCGGGTTGG AAACTTCTGT TTGCTGACAC TCAACCTTTT
GAAGTCAACA GCGAAAAATC AGCCGAGTGG AACCGTGGCG CTTATTTAGC TGAAGGTGTT
GCTCACTGTG GCGCATGTCA TACTCCACGT AATGCACTTG GCGGTGAAAA ATATGACCAA
ATGTATCAAG GTGCTGCCAT TGATGGTTGG ATTGCACCCT CATTAACCTC TACCAGCACG
TCACCACTCC CTTGGCGTTC GCAAGATTTC TACGAATACC TCAGCACAGG TAATTCGCTT
TACCATGGTA GTGCCGCAGG TCCAATGGCA CCGGTTATGC ACGATGGTTT ATCCGCTCTG
CCAGACAGTG ATCTTAGAGA CATTAGCAAT TATTTTGCCG ATCTTGATCG CACTACCAAA
ATGGATGAAT CACAATCTAA TAAGATTTTA CAAGCTGCAA TAGACGCACA ACATCAACAA
CCAGATCAAC GGATCGATGA AGGTGCGCGT TTGTATGCCA CTGCTTGCCA AGCATGTCAT
TACAGCAGCG ACCAATTAGT CAAAGGCCGG CTATTGATTA CCATAGGCTC AGCGACTCAT
CTTGATAAGC CAACGAACCT GATTAACGTC ATACTGGACG GTGTTAGTAG CGATCAAGGA
ATCAGCGGCG TGGTAATGCC AGGATTCCGT GATGCACTTA GCGATCAAGA CATTAGCGCA
ATAGCAGCTT ATTTGCGTCA AACTGCAGGG GAAAACATCT GGCCTAAATT ACAACAACAA
GTGGGCGAGA TCCGTAATCA ACCCCGATTT GAGCAATAA
 
Protein sequence
MLKRIVYGVC GAAIVGLCVF SIYAWYPAID PVIPAQTDYS PEIIEQGRVL AAAGYCSTCH 
TPSGGTPYAG NYEMHTDFGT IYSSNITPDV ETGIGNWSEA AFSRAMRIGV SRDGHHLLPA
FPYEHFNKMT DADINAIYAY IMTSVPAVNQ VKKDNDIPFP LNIRWFQAGW KLLFADTQPF
EVNSEKSAEW NRGAYLAEGV AHCGACHTPR NALGGEKYDQ MYQGAAIDGW IAPSLTSTST
SPLPWRSQDF YEYLSTGNSL YHGSAAGPMA PVMHDGLSAL PDSDLRDISN YFADLDRTTK
MDESQSNKIL QAAIDAQHQQ PDQRIDEGAR LYATACQACH YSSDQLVKGR LLITIGSATH
LDKPTNLINV ILDGVSSDQG ISGVVMPGFR DALSDQDISA IAAYLRQTAG ENIWPKLQQQ
VGEIRNQPRF EQ