| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1807 |
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| Symbol | |
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| ID | 4626160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 2192473 |
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| End bp | 2193774 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639796981 |
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| Product | ATP-dependent RNA helicase, DEAD box family protein |
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| Protein accession | YP_943183 |
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| Protein GI | 119945503 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.527975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.043326 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGTTG ATGCAATAGG TTTATCTGCC GAGTTATTAA AAGCTGTCAA AGCTTGCGGA
TATAAAAATT TAACCCCGAT TCAGCAGCAG GCAATTCCGA TTATCCGTAG CGGGTCGGAT
CTGCTTGCAA GTGCACAAAC AGGGACAGGT AAAACAGCGG CTTTTACCCT GCCTATTCTG
GATATATTAG CAAAAAATGC GAATGAAAAG CCAACAACAA ATACAACAAT TAAAGCCTTA
ATACTGACAC CTACGCGTGA ATTAGCAGCC CAAGTTGCAG CGAATGTAAA GGAATACAGT
CAGTTTTTAC CGCTAACATC CGGTGTTGTT TCGGGTGGCC GCAGTATGGA CTCACAAACC
AAAATGCTTA AAGTCGGCGT TGATGTATTA GTCGCAACAC CGGGTCGTCT GCTTGAACAC
TTAACCTTAC GAAATGTCGA TCTTTCCCAT GTTAAGTATC TTACGCTTGA TGAAGCTGAT
CGTATGTTAG ACCTGGGTTT CTTAACTGAC ATACAAAAAT TGATGGAAGC GATTAAACAA
AAACACCAGA CTTTAATGTT TTCCGCCACT TTTTCAAATA AAGTTAAAAC ATTAGCAAAA
CAGATATTAA CCACCCCAAA AACATTAGAG ATCTCACCGC AGAACTCAAC TGCTGGTAAG
GTAAAACAAC AGGTTTATTG GGTATCTGAA ACCCGTAAGA ATGAACTCTT ATCTGAGCTG
ATTGGGGTTA AAAACTGGAA ACAAGTGTTG GTCTTTGCGG GCACCAAAGA AAGCGCCAAT
CTGTTAGCAA AAGAGTTACA GCTAGACGGA ATCAAAACGG CCGTTTGCCA TGGAGATAAA
ACCCAAGGCG CACGTAATCA AGCGATCCAA AAGTTTACTG AAGGCAGTGT CCGTGTGTTA
GTGGCGACAG ATGTGGCAGC ACGTGGCCTT GATATTCCTG ATTTACCCTA CGTGGTCAAC
TTCCATCTTC CATTTTTAGC TGAAGATTAT ATTCATCGTA TTGGCCGTAC AGCGCGGGCA
GGTAAAAGTG GTACAGCGGT ATCATTAGTC AGCCCGAAAG ATGAGCAATT TTTAGATAAT
ATCGAAACGC TAATTGGCCG TAAGTTTGAA CGCATTGTGT ATCCGGGTTA TGAGATTGAT
AGCTCCCTGC CCGGCTATTA TGAGCAATCT AGTGACAAAC CGCTGAAAAA AAGTCGTTAC
AAAGCAACGC AAGAGCGCAA TAAAATGCTT GAGATCCAAA GAGCAAAAAA TACACCTGCG
GCCATTCGCA GAGAAAAGAA CAAAAATAAA AAGCAAAGAT AA
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| Protein sequence | MSVDAIGLSA ELLKAVKACG YKNLTPIQQQ AIPIIRSGSD LLASAQTGTG KTAAFTLPIL
DILAKNANEK PTTNTTIKAL ILTPTRELAA QVAANVKEYS QFLPLTSGVV SGGRSMDSQT
KMLKVGVDVL VATPGRLLEH LTLRNVDLSH VKYLTLDEAD RMLDLGFLTD IQKLMEAIKQ
KHQTLMFSAT FSNKVKTLAK QILTTPKTLE ISPQNSTAGK VKQQVYWVSE TRKNELLSEL
IGVKNWKQVL VFAGTKESAN LLAKELQLDG IKTAVCHGDK TQGARNQAIQ KFTEGSVRVL
VATDVAARGL DIPDLPYVVN FHLPFLAEDY IHRIGRTARA GKSGTAVSLV SPKDEQFLDN
IETLIGRKFE RIVYPGYEID SSLPGYYEQS SDKPLKKSRY KATQERNKML EIQRAKNTPA
AIRREKNKNK KQR
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