Gene Ping_1800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1800 
Symbol 
ID4626082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2184209 
End bp2185000 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content43% 
IMG OID639796974 
Productpeptidase M48, Ste24p 
Protein accessionYP_943176 
Protein GI119945496 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0722089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0408488 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAA TAAAACCATT TTTATTGTCG ACTGTAGTGG CCGCATCATT GACATTGTAT 
GGCTGCGCAA ACTCTCCAAC AGGTAGAACG CAAATTTTAC TCTTTTCGGG TACAGAGATG
TCACAGCTGG GCGCGCAGTC GTTCGAAGAG ATAAAAAAAC AGGAAAAGAT CAGTACGGAT
AAAAAAACAA ATGTCTATGT ACAGTGTGTG ACTAGCGCAA TTACCGCTCG TTTAGCACCT
CAATCTGATT TTACACAATG GGAGGTTGTT GTTTTTGATA GTGAACAGAT CAATGCCTTT
GCACTGCCAG GCGGTAAAAT AGGTGTTTAT AGCGGTTTAC TCAAAGTGGC GGTTAATCAA
GATCAATTAG CAACGGTGAT TGGCCATGAA ATTGGTCATG TGATGGCAAA TCATAGCAAC
GAACGACTTT CTAGAAGTCA GTTAGCCAAT ACGGGATTAC AACTTTCTAA TCTTGCTCTG
GGGGGAGCTG AATATCAAAA TATAGCAATG GCGGGGCTTG GTTTAGGTGT ACAGTATGGG
ATCTTAATGC CCTATGGGCG TGCGCAGGAG TCTGAGTCTG ACACGCTAGG ATTAAAGCTG
ATGGCTGAAG CTGGGTTTGA TCCGCAACAA AGTGTTAATT TGTGGGTCAA TATGGCCAAG
GCTTCCGGTG GAAATCAGCC ACCTGAGTTA TTATCCACCC ACCCGTCAAA CTCAACGCGT
ATTAAAAACT TAAAGGCGCA GGTAGCGGCT TTACCTGCAA GTAATGTAAA AGGTCAGAAT
TGTAAATTGT AA
 
Protein sequence
MKIIKPFLLS TVVAASLTLY GCANSPTGRT QILLFSGTEM SQLGAQSFEE IKKQEKISTD 
KKTNVYVQCV TSAITARLAP QSDFTQWEVV VFDSEQINAF ALPGGKIGVY SGLLKVAVNQ
DQLATVIGHE IGHVMANHSN ERLSRSQLAN TGLQLSNLAL GGAEYQNIAM AGLGLGVQYG
ILMPYGRAQE SESDTLGLKL MAEAGFDPQQ SVNLWVNMAK ASGGNQPPEL LSTHPSNSTR
IKNLKAQVAA LPASNVKGQN CKL