Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1800 |
Symbol | |
ID | 4626082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 2184209 |
End bp | 2185000 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639796974 |
Product | peptidase M48, Ste24p |
Protein accession | YP_943176 |
Protein GI | 119945496 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0722089 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0408488 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATAA TAAAACCATT TTTATTGTCG ACTGTAGTGG CCGCATCATT GACATTGTAT GGCTGCGCAA ACTCTCCAAC AGGTAGAACG CAAATTTTAC TCTTTTCGGG TACAGAGATG TCACAGCTGG GCGCGCAGTC GTTCGAAGAG ATAAAAAAAC AGGAAAAGAT CAGTACGGAT AAAAAAACAA ATGTCTATGT ACAGTGTGTG ACTAGCGCAA TTACCGCTCG TTTAGCACCT CAATCTGATT TTACACAATG GGAGGTTGTT GTTTTTGATA GTGAACAGAT CAATGCCTTT GCACTGCCAG GCGGTAAAAT AGGTGTTTAT AGCGGTTTAC TCAAAGTGGC GGTTAATCAA GATCAATTAG CAACGGTGAT TGGCCATGAA ATTGGTCATG TGATGGCAAA TCATAGCAAC GAACGACTTT CTAGAAGTCA GTTAGCCAAT ACGGGATTAC AACTTTCTAA TCTTGCTCTG GGGGGAGCTG AATATCAAAA TATAGCAATG GCGGGGCTTG GTTTAGGTGT ACAGTATGGG ATCTTAATGC CCTATGGGCG TGCGCAGGAG TCTGAGTCTG ACACGCTAGG ATTAAAGCTG ATGGCTGAAG CTGGGTTTGA TCCGCAACAA AGTGTTAATT TGTGGGTCAA TATGGCCAAG GCTTCCGGTG GAAATCAGCC ACCTGAGTTA TTATCCACCC ACCCGTCAAA CTCAACGCGT ATTAAAAACT TAAAGGCGCA GGTAGCGGCT TTACCTGCAA GTAATGTAAA AGGTCAGAAT TGTAAATTGT AA
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Protein sequence | MKIIKPFLLS TVVAASLTLY GCANSPTGRT QILLFSGTEM SQLGAQSFEE IKKQEKISTD KKTNVYVQCV TSAITARLAP QSDFTQWEVV VFDSEQINAF ALPGGKIGVY SGLLKVAVNQ DQLATVIGHE IGHVMANHSN ERLSRSQLAN TGLQLSNLAL GGAEYQNIAM AGLGLGVQYG ILMPYGRAQE SESDTLGLKL MAEAGFDPQQ SVNLWVNMAK ASGGNQPPEL LSTHPSNSTR IKNLKAQVAA LPASNVKGQN CKL
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