Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1790 |
Symbol | |
ID | 4626072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 2175056 |
End bp | 2175586 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 639796966 |
Product | transcriptional regulator of TetR family protein |
Protein accession | YP_943168 |
Protein GI | 119945488 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.127999 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAA AATCTCAAAT ACTCACATTA GCAGAAAACA AAGTAAGGTC TGGCGGCTAC GGTAATTTTA GCTTTAGAGA GCTTGCCGAT GAAATAGGCA TTAAAAGCTC AAGTGTGCAT TACTATTTTC GTACCAAAGC TGATTTAGCT GCAGAATTAG CGCATCAGTA TACCGATGTG TTTTTAGCAT CACTAAATGA TGAGAAAGCA AAGCAACAAG AGAGTAGTGC AATTAACCTC TATATTAATA TGTTCAAAGC CGCATTGGAA AAAGATAACC AAATGTGCTT ATGTGGTTTA TTAGGCGCAC AGTTAGACGC CTTACCAGAG CAAGTAAAAA GTGAAATTAA ACGTTTTTTT GAATTGAATA TAAACTGGTT ACAACAAAGA TATATTGAAG AAAAAGACAT GACAGCAGCA AGTGCCAAAG CTAAAGCTAT TCATTTATTA GCCTCTTTAG AGGGCATAAT GATTTTATCT AAAGTATTAG ATGATAAAAC GGTTTTTGAT AATATTCAAT ATTATACTTA A
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Protein sequence | MNKKSQILTL AENKVRSGGY GNFSFRELAD EIGIKSSSVH YYFRTKADLA AELAHQYTDV FLASLNDEKA KQQESSAINL YINMFKAALE KDNQMCLCGL LGAQLDALPE QVKSEIKRFF ELNINWLQQR YIEEKDMTAA SAKAKAIHLL ASLEGIMILS KVLDDKTVFD NIQYYT
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