Gene Ping_1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1790 
Symbol 
ID4626072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2175056 
End bp2175586 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content33% 
IMG OID639796966 
Producttranscriptional regulator of TetR family protein 
Protein accessionYP_943168 
Protein GI119945488 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.127999 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAA AATCTCAAAT ACTCACATTA GCAGAAAACA AAGTAAGGTC TGGCGGCTAC 
GGTAATTTTA GCTTTAGAGA GCTTGCCGAT GAAATAGGCA TTAAAAGCTC AAGTGTGCAT
TACTATTTTC GTACCAAAGC TGATTTAGCT GCAGAATTAG CGCATCAGTA TACCGATGTG
TTTTTAGCAT CACTAAATGA TGAGAAAGCA AAGCAACAAG AGAGTAGTGC AATTAACCTC
TATATTAATA TGTTCAAAGC CGCATTGGAA AAAGATAACC AAATGTGCTT ATGTGGTTTA
TTAGGCGCAC AGTTAGACGC CTTACCAGAG CAAGTAAAAA GTGAAATTAA ACGTTTTTTT
GAATTGAATA TAAACTGGTT ACAACAAAGA TATATTGAAG AAAAAGACAT GACAGCAGCA
AGTGCCAAAG CTAAAGCTAT TCATTTATTA GCCTCTTTAG AGGGCATAAT GATTTTATCT
AAAGTATTAG ATGATAAAAC GGTTTTTGAT AATATTCAAT ATTATACTTA A
 
Protein sequence
MNKKSQILTL AENKVRSGGY GNFSFRELAD EIGIKSSSVH YYFRTKADLA AELAHQYTDV 
FLASLNDEKA KQQESSAINL YINMFKAALE KDNQMCLCGL LGAQLDALPE QVKSEIKRFF
ELNINWLQQR YIEEKDMTAA SAKAKAIHLL ASLEGIMILS KVLDDKTVFD NIQYYT