Gene Ping_1772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1772 
Symbol 
ID4626105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2153824 
End bp2155260 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content41% 
IMG OID639796952 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_943154 
Protein GI119945474 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.577692 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.772598 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAA ACATTTTGGT GGTGGGGGCC TCGGGTTATG TGGGTAGTCA ACTCGTCCCG 
GCGCTTGCGC AGACAGGTTA TAACGTCACA GCGACAGCGC GGGATCCCGC GGTACTTGCA
AAACGGAGTT GGAGCCGACT CGATAATATT AAAATAGTGA CATTAGATTT AACCCTTAAT
ACAGATTTAT CCCTTATTCT GCAGGATATT GATATTGTTT TTTATCTTGT GCATAGCATG
GGCTATGGCC CGAATTTTGT TGATATTGAA CTTGATAACG CTAAAAATTT CAGTGCACAG
TTAAAAGCCA GTGATGTTAA ACAGCTTATC TATTTAGGCT CTCTGCAACC TGCTTCCAGC
GATTCCAAGC ATTTTGTTTC ACGTAAAAAA ACCGGTGATA TTTTAAGAGA AAGCAATGTT
ATCGTCACTG AATTAAGAGC TGGCATTATT GTAGGTGCGG GCTCTGCAGT ATTTGAAGTG
ATGCGTGATG TGGTTTATCA CCTGCCTGTT ATGATCATGC CAAAGTGCAT AAATTCTCAC
AACTCACCTA TTGCCTTACA AAATCTGCTC TATTACCTGC TGGCGTTACT CAAACTTCCT
GCCGTCACGC ATAAAATTTT TGATGTTGCA GGCCCGGAGT TAATTACCTA TCAAAAACAG
CTACAAATAA TTGCCAATTT GATGGGTAAA AAAGTACATA TTATCCCCCT GTCAATGTTA
ACAACTAAGG TTGCTGCCCT CGGGTTTAAA GTTATCACCT CGGTGCCGAC CAATATTGCC
AAAGCATTGG TGGAGGGAAT GTGCTATGAC TTAACGGCCG ACGGATCCGA ACTCCAGTCT
CTTATTCCAC AAGCATTACT TTCTTATGAA CAAGCCGTGG CTGAAAGCTT AGCCAATGAA
CAAGATATTA TTAATAGTGA CCTATGGGGA TTTGATCCCG ATGCGCTTTC TTATTGGCAA
CCAGGTTATG CTTATTATCC AAAGCAAGCG GGTCATTGTT TTAAAACCGA TGTCAGTGCT
GAATGCCTTT GGCAGCAGAT TCAATTAATC GGTACGCAGG AAGGTTATTT TTATGCAAAT
TATTTATGGC GAATCAGAGA AGGGATAGAT CACCTTGCTG GTGGGAATTC CTTAACGCGT
TATCGTAGCC ATCCTGATAA AATAGCATTA GGTGATAGAA TTGACTCCTG GAAAGTTATT
GGCATTAAAG AGAATAAATT TTTGTCTTTA TTAATGGGCA TGAAAGCACC AGGATTGGGT
CGACTTGAAT TTAATATTGT GGATAAAGGG GCATATCGGG AGTTAGATAT ACGTGCCTGG
TGGCATCCGG CAGGTTTTTT AGGCTTATTA TATTGGTTTG CACTGATGCC CGCACACTTA
TTTATTTTCA AGGGAATGAC AAAAGCTATA GTGAAAAAAT GCAAAACTAA AATGTAA
 
Protein sequence
MTKNILVVGA SGYVGSQLVP ALAQTGYNVT ATARDPAVLA KRSWSRLDNI KIVTLDLTLN 
TDLSLILQDI DIVFYLVHSM GYGPNFVDIE LDNAKNFSAQ LKASDVKQLI YLGSLQPASS
DSKHFVSRKK TGDILRESNV IVTELRAGII VGAGSAVFEV MRDVVYHLPV MIMPKCINSH
NSPIALQNLL YYLLALLKLP AVTHKIFDVA GPELITYQKQ LQIIANLMGK KVHIIPLSML
TTKVAALGFK VITSVPTNIA KALVEGMCYD LTADGSELQS LIPQALLSYE QAVAESLANE
QDIINSDLWG FDPDALSYWQ PGYAYYPKQA GHCFKTDVSA ECLWQQIQLI GTQEGYFYAN
YLWRIREGID HLAGGNSLTR YRSHPDKIAL GDRIDSWKVI GIKENKFLSL LMGMKAPGLG
RLEFNIVDKG AYRELDIRAW WHPAGFLGLL YWFALMPAHL FIFKGMTKAI VKKCKTKM