Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1772 |
Symbol | |
ID | 4626105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 2153824 |
End bp | 2155260 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639796952 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_943154 |
Protein GI | 119945474 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.577692 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.772598 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAAAA ACATTTTGGT GGTGGGGGCC TCGGGTTATG TGGGTAGTCA ACTCGTCCCG GCGCTTGCGC AGACAGGTTA TAACGTCACA GCGACAGCGC GGGATCCCGC GGTACTTGCA AAACGGAGTT GGAGCCGACT CGATAATATT AAAATAGTGA CATTAGATTT AACCCTTAAT ACAGATTTAT CCCTTATTCT GCAGGATATT GATATTGTTT TTTATCTTGT GCATAGCATG GGCTATGGCC CGAATTTTGT TGATATTGAA CTTGATAACG CTAAAAATTT CAGTGCACAG TTAAAAGCCA GTGATGTTAA ACAGCTTATC TATTTAGGCT CTCTGCAACC TGCTTCCAGC GATTCCAAGC ATTTTGTTTC ACGTAAAAAA ACCGGTGATA TTTTAAGAGA AAGCAATGTT ATCGTCACTG AATTAAGAGC TGGCATTATT GTAGGTGCGG GCTCTGCAGT ATTTGAAGTG ATGCGTGATG TGGTTTATCA CCTGCCTGTT ATGATCATGC CAAAGTGCAT AAATTCTCAC AACTCACCTA TTGCCTTACA AAATCTGCTC TATTACCTGC TGGCGTTACT CAAACTTCCT GCCGTCACGC ATAAAATTTT TGATGTTGCA GGCCCGGAGT TAATTACCTA TCAAAAACAG CTACAAATAA TTGCCAATTT GATGGGTAAA AAAGTACATA TTATCCCCCT GTCAATGTTA ACAACTAAGG TTGCTGCCCT CGGGTTTAAA GTTATCACCT CGGTGCCGAC CAATATTGCC AAAGCATTGG TGGAGGGAAT GTGCTATGAC TTAACGGCCG ACGGATCCGA ACTCCAGTCT CTTATTCCAC AAGCATTACT TTCTTATGAA CAAGCCGTGG CTGAAAGCTT AGCCAATGAA CAAGATATTA TTAATAGTGA CCTATGGGGA TTTGATCCCG ATGCGCTTTC TTATTGGCAA CCAGGTTATG CTTATTATCC AAAGCAAGCG GGTCATTGTT TTAAAACCGA TGTCAGTGCT GAATGCCTTT GGCAGCAGAT TCAATTAATC GGTACGCAGG AAGGTTATTT TTATGCAAAT TATTTATGGC GAATCAGAGA AGGGATAGAT CACCTTGCTG GTGGGAATTC CTTAACGCGT TATCGTAGCC ATCCTGATAA AATAGCATTA GGTGATAGAA TTGACTCCTG GAAAGTTATT GGCATTAAAG AGAATAAATT TTTGTCTTTA TTAATGGGCA TGAAAGCACC AGGATTGGGT CGACTTGAAT TTAATATTGT GGATAAAGGG GCATATCGGG AGTTAGATAT ACGTGCCTGG TGGCATCCGG CAGGTTTTTT AGGCTTATTA TATTGGTTTG CACTGATGCC CGCACACTTA TTTATTTTCA AGGGAATGAC AAAAGCTATA GTGAAAAAAT GCAAAACTAA AATGTAA
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Protein sequence | MTKNILVVGA SGYVGSQLVP ALAQTGYNVT ATARDPAVLA KRSWSRLDNI KIVTLDLTLN TDLSLILQDI DIVFYLVHSM GYGPNFVDIE LDNAKNFSAQ LKASDVKQLI YLGSLQPASS DSKHFVSRKK TGDILRESNV IVTELRAGII VGAGSAVFEV MRDVVYHLPV MIMPKCINSH NSPIALQNLL YYLLALLKLP AVTHKIFDVA GPELITYQKQ LQIIANLMGK KVHIIPLSML TTKVAALGFK VITSVPTNIA KALVEGMCYD LTADGSELQS LIPQALLSYE QAVAESLANE QDIINSDLWG FDPDALSYWQ PGYAYYPKQA GHCFKTDVSA ECLWQQIQLI GTQEGYFYAN YLWRIREGID HLAGGNSLTR YRSHPDKIAL GDRIDSWKVI GIKENKFLSL LMGMKAPGLG RLEFNIVDKG AYRELDIRAW WHPAGFLGLL YWFALMPAHL FIFKGMTKAI VKKCKTKM
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