| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1757 |
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| Symbol | |
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| ID | 4623962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 2139153 |
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| End bp | 2140484 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639796937 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_943139 |
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| Protein GI | 119945459 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0654458 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCA ATAAAAAACG CTTTGCATTC CCAGGCATCA TTTTAGGGGC TGTGGTGTTA
TTTGCTGCAA TCGCCTTAAA ACCGTCCCCA GAGTTACAAG AAAATTATGA CAAAGCACGT
TTAGTTGATG TCATGGTATT ATCCAAAAAA AATAGCGCGC CACAGATTAT AGGCTATGGC
CGAGTGGCAC CAAAGCATAC TTGGCAGGGC ATTGCAGAAG TGAAGGGTAA AATAATTTAT
CGCCATCCAG ATCTTGAAAG CGGTCGTCTT ATTCCAAAAG GCACCTTAGT ACTGAAAATT
GATCCTCTGG AATATCAATT AAAAATAGCG CAGGCGGAAG CCAATCTAAA TTCATCAAAA
GTACAATTAG GCCGGATTGA TCAGGAAGAG CAGAATATCA ATGCCAGTCT TAATATTGAA
CAACAAAAAC TGACTTTGAC GGCTCAGGAA TACCAACGAA AATCATTACT CAAACAAAAA
AAACTAATTT CCAATTCAGA TCTGGAAAAT GAACAAAAAT TATTATTGGC ACAGCGCAGT
CTAGTGCAGG AATTAACCAG CAGACTGGCA TTATTACCCG ACGATAAAAA AGTTATTAAA
GCGCAAATCA GCGTCAATCA AGCTTTATTA GCAGATACCC ATCGGCAGTT GGAAAAGACA
CATTTCACCT TACCTTTTGA TGCAAGAATT GCCGACGTTA ATATCGAACA AGCACAAGCG
GTGTTGATCG GTGCGGTATT ATTTGAAGCC TACCAACCTG GTATAATGGA GATCAAAGCT
GAACTGTCAC TGCAGGATGC AAACACCCTG CGGAAGAGCA TTCCAGCCCC TTTAGACGAT
CCGTTAGCCT CCATTGCAAA ATTAAATTTT AACGCAAGTA TAGAGCTATT GATTGGCGAA
AGCACTCAAC ACTGGCCTGC AAAATTAACC CGTATTGCTG AAAAAATAAA TCCAGATCAG
GCGACGCTCG GTTTTTATTT AGAAGTGAAA CAGAATATTA AACAGTTAGA TTTAAGTAAT
ACACTTACTA AAGGTATGTT TGTCACTGCT AAAGTGCAGG GATTTTCATC ACCGCATTTT
GTCATACCGG AAAAAGCATT ACATGGTGAT CATATTTATC TGATGGATAA GCAGAATAAA
CTTCAAATAA AACCGATTAC CATCCTATTT CGGAATGCAC AGGGTGTTGC CATTTCCGGT
GAAATAAATG CCCTCGACCA ATTAATTTTA AATGACCTTA TTCCGGCTAT TGCCGGAATG
AGTCTAAAAA TAAAAGAATC CGACAGTATT GATTCAAATA CAGCCAGAAT ACAAAAAGAG
AGTGTCAAGT GA
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| Protein sequence | MTSNKKRFAF PGIILGAVVL FAAIALKPSP ELQENYDKAR LVDVMVLSKK NSAPQIIGYG
RVAPKHTWQG IAEVKGKIIY RHPDLESGRL IPKGTLVLKI DPLEYQLKIA QAEANLNSSK
VQLGRIDQEE QNINASLNIE QQKLTLTAQE YQRKSLLKQK KLISNSDLEN EQKLLLAQRS
LVQELTSRLA LLPDDKKVIK AQISVNQALL ADTHRQLEKT HFTLPFDARI ADVNIEQAQA
VLIGAVLFEA YQPGIMEIKA ELSLQDANTL RKSIPAPLDD PLASIAKLNF NASIELLIGE
STQHWPAKLT RIAEKINPDQ ATLGFYLEVK QNIKQLDLSN TLTKGMFVTA KVQGFSSPHF
VIPEKALHGD HIYLMDKQNK LQIKPITILF RNAQGVAISG EINALDQLIL NDLIPAIAGM
SLKIKESDSI DSNTARIQKE SVK
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