Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1746 |
Symbol | |
ID | 4626711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 2128141 |
End bp | 2129661 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639796927 |
Product | sensor histidine kinase PAS domain-containing protein |
Protein accession | YP_943129 |
Protein GI | 119945449 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGATC ATGATAATTT AAACCTCCAT GCGACCAATG GATCCGTTTT GAAACAGTCT GTGTCGGAGA AAATGGGAGA CAATCTACAA TACCAGCAGC TCTACGATAT GCTGCTTAAT GCCACTCCTT CCTCCGTATT ATTGATTGAC AGCAATTTCC GTATTACCTC GGCTAATCGT AATTTCCTCA CTCGAAGTCA GCGCACTCTT TCAGCTACAA TAGGTTGCCG GCTTAGGGAA GTCTTCCCGA TAGTTATTCT AGAACGAATG GATATCAAGC AACAGATCCA AGAAGTGTTC AATACTCACA AAGCTTCCGT AGGACAACGT ATGACCTATC GGGCCCCCGG CGTGCCGTTT AAAACTTATT ATTATCGTAT TTTGCCTATA GAATCCAGCG AGCAGTGTGA ACAAGTCATG TTGCTGATGG AAGATATTAC CGATCAGATC CGCCTCAGTG AAGATATGCG TCGTGTGGAA AGTCACCTCG GTAGCATTGT GGAAAGCGCT AGCGACTTGA TGCTGTCTTT AGATACTGAA GGGCGTATCT TAACTTGGAA CTCGGCGGCA GAAAAACTCT CAGGATTTAC GTTTCTAAAG GTTCAAGGAA AGTTCTTTTT CGAGTTTTTC AAAGCCTCTG AGCATTTAGA AATCAAGACG TTTTTTATCA ATATATGTAT TAATGTTTGC TCCCTGAACG CCGAGTGGGA GTTGATCTCT AAGAAAGGTA TTGAAATCTC CGTTGCCTGG ATTTTCTCGC CAATGAAAGA TGACGATGCC AAAACCGTAG GCATTGTTGC TGTCGGGCGG GATCTGACCG AACAACGCAA GTTAGAGGTC GAGTTGCGGC AGTCACAAAA ACTAGCCGCA CTCGGGGTAA TGGCTGGCGG TATCGCCCAC GAAATTCGTA ACCCCCTTGC AGTTTGTTCC TCGGCGGCGC AATTTCTGAT GGAAGAGGGG CTTCCACTTG AATTCAGAAC CGAATGTGCG AAGAAAATCC AAGTCAGTCT TGAGAAGGCT TCCTGCATCA TTGAAAATCT GTTGCGCTTT TCCAGACCTT CCTGTGAGCA AAATATGGTG CCGATGGATC TGGATACTGT GCTATGCGAA ACGATTATGT TAATCGCAAA CCAAGCCAAG GTATATAAAA TTGAAATAGT CTATCTACCT ATTGGAAAAT GCAGTTTGGT GTCTGGAATA TTTACTCTGC TACAGCAAGT CTTTATGAAT TTTTTCCTGA ATGCGATTAA TGCGATGCCC GAGGGTGGTG AGCTAGGCAT TATCCTGGAA CAGCAAGGCG ATGAAGCGCT AGTTTGTATC AGGGACACGG GGACAGGGAT CTTGGAAGGC GCACTGGATA ATATCTTCGA TCCTTTTCAT ACTTCCTCCC CGGCAGGAAA AGGAGTTGGA CTCGGACTCT CTCTCTGTTA TTCGATTGTT AAACAACATA GGGGGAGTAT TAGCGTGGAT AGCATGGTGG GTAAGGGAAG CACTTTCACA GTATTGCTAC CAATATTATG A
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Protein sequence | MTDHDNLNLH ATNGSVLKQS VSEKMGDNLQ YQQLYDMLLN ATPSSVLLID SNFRITSANR NFLTRSQRTL SATIGCRLRE VFPIVILERM DIKQQIQEVF NTHKASVGQR MTYRAPGVPF KTYYYRILPI ESSEQCEQVM LLMEDITDQI RLSEDMRRVE SHLGSIVESA SDLMLSLDTE GRILTWNSAA EKLSGFTFLK VQGKFFFEFF KASEHLEIKT FFINICINVC SLNAEWELIS KKGIEISVAW IFSPMKDDDA KTVGIVAVGR DLTEQRKLEV ELRQSQKLAA LGVMAGGIAH EIRNPLAVCS SAAQFLMEEG LPLEFRTECA KKIQVSLEKA SCIIENLLRF SRPSCEQNMV PMDLDTVLCE TIMLIANQAK VYKIEIVYLP IGKCSLVSGI FTLLQQVFMN FFLNAINAMP EGGELGIILE QQGDEALVCI RDTGTGILEG ALDNIFDPFH TSSPAGKGVG LGLSLCYSIV KQHRGSISVD SMVGKGSTFT VLLPIL
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