| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1723 |
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| Symbol | |
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| ID | 4627100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 2096969 |
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| End bp | 2098993 |
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| Gene Length | 2025 bp |
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| Protein Length | 674 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639796906 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_943108 |
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| Protein GI | 119945428 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.716751 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAAG CCGTTAATGA AAAAGAAAAA CTTATTCAAA AGCGCAAGAA AGAGAAACTT
GCTGACGAGC TAATCATCGC CAATCTTGCT GGTGAACTGG TGATTGCCGC TTCTAAACTT
GCCAGCGCCA ATAAAGAGCT GACATTTCAA AATAACGAAA AAGAAAAGCG TACTGCCGAA
CTTGCCATCG CCAATAAAGA GCTGACATTT CAAAATAACG AAAAAGAAAA ACGGGCGGCT
GAGCTTGCCA TCGCCAATAA AGAGCTGACA TTTCAAAATA ACGAAAAAGA GAAGCGTACT
GTCGAACTTG CCATCGCCAA TAAAGAACTT AGTATTGCCG CCATCGTTTT CGAATCCCAA
GAAGGCATGA TGGTGACCGA TGCCAGCAAG ATTATTCTTC GAGTGAATCA TGCTTTTACT
CATATTACAG GTTATAGCAG CGATGATGCT GTCGGTCAGA CACCCAGTCT GCTTAAATCA
GGCATGCACA ATAAAGCGTT CTACGCTACC ATGTGGAAGA AAATCAACAG CACCGGGTTG
TGGGAAGGTG AGATCTTGAC TCGTCGCAAG AATGGCGAAA TCTATCCGGA ATATCTGCGC
ATTACGGCCG TTAAAAATGC GCAGGGCATT GTCACCAACT ACGTAGCGAC ACGCACTGAT
ATCACCGCGA GTAAAGCGGC ATCGAATGAA ATCGAGAAGC TCGCTTTCTA TGATCCCCTT
ACGCAGTTAC CTAACCGCCG TCTTTTTATT GACCGGCTAA ATCAAGCGTT AGCTTTAAGT
ACCCATAGTC GTCAGCGAGG CGCGCTGCTG TTTCTCGACT TGGATCAGTT TAAAACACTG
AATGACACTC TGGGACATGA TATTGGTGAT TTGCTGTTAA AAAAAGTGAC AGAGCGCCTG
AGTGCCAGCC TTCGAGAAAG CGATACTGTC GCCCGTTTTG GCGGTGATGA GTTTGTGGTG
CTATTGGAAA ACCTGAGCAC ATATAGCATT GAAGCGGCAG CTCAAACTAG AGATATCGCG
ACAAAAATCA GCCTCTCACT CAACCAACCT TATCAACTTC TTGATCACGT TTACCATAAC
ACCCCGAGCA TAGGCGCCAC ATTGTTCATT GGCCATCAAC TGACGGCAGA GGAATTGTTA
AAACAGGCAG ATATTGCGAT GTATCAATCC AAGGCCCAAG GCGGTAATAC CCTGCGCTTT
TTTGACCAAA TGATGCAGAA GGCTATCATT GCTCGTGTTG ATCTTCAAAA TGAGCTACGG
CAAGCCATTA AGCAGCAGCA ATTTCAATTA TATTATCAAA TACAAGTGGA TAGCAACAGT
CAGCCTTTAG GTGCCGAAGT CTTAATTAGT TGGCAGCATC CGGAACGTGG CAGAATTTCC
CCACGGCACT TTATTCCTTT GGCGGAAGAC ATAGGGTTGA TTCTGCCAAT TGGGCAATGG
GTGCTGGAAA CAGTTTGTGC GCAGCTTAAA ACATGGCAGG AAGATCCTCT CACTGAGGAT
CTCGTGCTTG CCGTCAATGT GAGTGCCAAG CAATTACATC AAGTTGACTT TGTGGAGCAA
GTGATCGCCA CTCTGCAACG CCATAGCACT AATCCGGCAC GACTCAAACT AGAGCTAACA
GAAAGCATAC TGCTTAATAA CATTACTGAT ATTATTGCCA AAATGAAAGC GCTCAACAAG
ATAGGCATTC GTTTCTCATT AGATGACTTT GGTACCGGCT ATTCATCTTT GCAATATCTG
AAAATGCTGC CGCTAGATGA ATTGAAAATA GACCAGTCAT TTGTACGTAA TATTGCCACC
GACAGCAGTG ACAGAGCGAT AGTGCACACC ATTATTACGA TTGCCTCCAG CCTGGATATG
AACGTTATCG CTGAGGGTGT AGAGACCAAT GCGCAACGTC TGTTTCTGCA GAAAAAAGGC
TGCTTACGTT ATCAAGGTTA TTTATTTAGC AAACCAGTGC CGATTAAAGA ACTTGAGGCT
ATTTTGAAAA GGCTGAACAC AATACCCTTA CCGGATAAAA AATAA
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| Protein sequence | MTEAVNEKEK LIQKRKKEKL ADELIIANLA GELVIAASKL ASANKELTFQ NNEKEKRTAE
LAIANKELTF QNNEKEKRAA ELAIANKELT FQNNEKEKRT VELAIANKEL SIAAIVFESQ
EGMMVTDASK IILRVNHAFT HITGYSSDDA VGQTPSLLKS GMHNKAFYAT MWKKINSTGL
WEGEILTRRK NGEIYPEYLR ITAVKNAQGI VTNYVATRTD ITASKAASNE IEKLAFYDPL
TQLPNRRLFI DRLNQALALS THSRQRGALL FLDLDQFKTL NDTLGHDIGD LLLKKVTERL
SASLRESDTV ARFGGDEFVV LLENLSTYSI EAAAQTRDIA TKISLSLNQP YQLLDHVYHN
TPSIGATLFI GHQLTAEELL KQADIAMYQS KAQGGNTLRF FDQMMQKAII ARVDLQNELR
QAIKQQQFQL YYQIQVDSNS QPLGAEVLIS WQHPERGRIS PRHFIPLAED IGLILPIGQW
VLETVCAQLK TWQEDPLTED LVLAVNVSAK QLHQVDFVEQ VIATLQRHST NPARLKLELT
ESILLNNITD IIAKMKALNK IGIRFSLDDF GTGYSSLQYL KMLPLDELKI DQSFVRNIAT
DSSDRAIVHT IITIASSLDM NVIAEGVETN AQRLFLQKKG CLRYQGYLFS KPVPIKELEA
ILKRLNTIPL PDKK
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