Gene Ping_1718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1718 
Symbol 
ID4627095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2093130 
End bp2094395 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content42% 
IMG OID639796901 
Producttransporter protein 
Protein accessionYP_943103 
Protein GI119945423 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1914] Mn2+ and Fe2+ transporters of the NRAMP family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.820269 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATA GCGCAACATT AGATACCCCA CACAAAAGTA AACTCAGCCA CCTCCTTCAA 
TCGCTTGGTC CCGGGATCAT GATGGCAACC GCTGCTGTTG GTGGCTCACA CCTTGTAGCT
TCAACTAAAG CTGGGGCTAT TTTTGGTTGG CAATTAGCGC TGCTGATTTT ACTGGTGAAT
TTTCTTAAAT ATCCATTTTT CAGAGCGGGT GTTACTTATA CTATGGGCAC GGGGCAAAGT
TTGATCGCCG GTTATGCAGA TATGGGTAAA GGTTATTTGT GGTTGTTTAC CTTGTTAACC
GCTATGTCAG CCGTGATTAA TACTGCCGCG TTAACTATCT TTAGTGCCAG TTTATTAGGT
ATATTTCTAC CTTTTGATTT ATCACTCCCG GTGTTATCAG CTATTGTTAT TATTGCCTGT
TTGGCAATTT TATTACGTGG CCACTTTAAT GCCTTAGAAG GTTTAGCGAA AATCATAATG
GGAGTCTTAA CGGTGACCAC ACTTATTGCG GTGGTGGTCG CTGCGAATCA GGTACAAGCT
GTGCCTGCTG ACTTTAATCC CCCTTCGGCA TGGAGCATTG CTTCCATCGG ATTTATTGTG
ATTATGATGG GCTGGATGCC GGCGCCGATT GAAATCTCCT GCTTAACATC GCTATGGTTA
AAACGACAAT GCAAAGAGAT CAAAGTAACC AATCAATCTG CTTTGTTTGA TTTTAACGTG
GGATATATTA TTACTGCCTT ATTAGCTATC GCATTTTTAG CGCTTGGCGC GTTAGTTTTG
CACGGTCATA CAGACAGTTT AGAGAAGTCA GGCATTGCTT TTTCACATCA ACTGGTGGGT
ATGTATGCCA GTACTATTGG TGAATGGTCT AAAATGTTGA TTGCAGTGAT TGCCTTTGGT
TGTATTTTTG GTAGTACTAT TACCGTTATT GATGGTTATG CGCGTGCACT TGCAGAAGCT
AAAGCACTGC TGCAACACTC GAACGATGAA CCTCGCCATA ATAGTTGGAT GTTATTAATC
AGCGCTTGTG CGATGGCGGT TATCTTGTTT TTTGTTTCAT CATTGATGGC GATGCTGAAT
TTTGCGATGG TATTAGCTTT TATGACCACG CCTATTTTTG CTTTGCTTAA CTATAAGCTG
GTCAACGGCA GTAACTTACC CGTTGGGCTG GCATTAACCA AAAAAATGAA AGTGTTATCC
TGGTTAGGCT TAACTTACTT ATTTGGTTTT CTAGCGCTAT TTATCTGGTG GAAATGGCTG
ATGTGA
 
Protein sequence
MENSATLDTP HKSKLSHLLQ SLGPGIMMAT AAVGGSHLVA STKAGAIFGW QLALLILLVN 
FLKYPFFRAG VTYTMGTGQS LIAGYADMGK GYLWLFTLLT AMSAVINTAA LTIFSASLLG
IFLPFDLSLP VLSAIVIIAC LAILLRGHFN ALEGLAKIIM GVLTVTTLIA VVVAANQVQA
VPADFNPPSA WSIASIGFIV IMMGWMPAPI EISCLTSLWL KRQCKEIKVT NQSALFDFNV
GYIITALLAI AFLALGALVL HGHTDSLEKS GIAFSHQLVG MYASTIGEWS KMLIAVIAFG
CIFGSTITVI DGYARALAEA KALLQHSNDE PRHNSWMLLI SACAMAVILF FVSSLMAMLN
FAMVLAFMTT PIFALLNYKL VNGSNLPVGL ALTKKMKVLS WLGLTYLFGF LALFIWWKWL
M