Gene Ping_1702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1702 
Symbol 
ID4626456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2077076 
End bp2077975 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content39% 
IMG OID639796887 
ProductROK family protein 
Protein accessionYP_943089 
Protein GI119945409 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0394956 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTGG GATTAGATAT TGGTGGAACA AAAATTGAAG GTGTTGGTCT TGATTCAGTG 
ACATACGAAA CACTGGTTAC TTATCGCAAT GTGACTTATA CAAAGACTTA TAAGGGTTTC
TTGTTGTCGG TAATATCAGT CATTGATGAA GTGGCAAAGT ACGGTAATAT TGAATCTATT
GGTATAGGTT GTTGCGGTTC GGTGGATAAA GCTGGACTAA TGCAGGGGGC AAACCTACTC
ATTTTAAATG GTCAAGATTT TATTGGTGAC ATCAAAAATA AGAGTAACGT ACCTGTTGCA
ATCGCTAATG ATGCTGACTG TTTGGCACTT TCTGAATTTA AAGATGGAGC AGCGAAAGAG
GCACAGAATT CATGTGTTGC AATTATTCTT GGTACGGGTT GTGGTTCAGG TCTAATTATT
CACAATAAAC TGGTTACTGG CTTGAATAAT TTGGGCGGAG AACTAGGACA TAGTCCGCTA
CCAAATTATT TAGCAGAAGT AGACGGTCCG GAAGTATTTT GCTACTGCGG ATCTAAAAAC
TGTACTGAAA CATTCGTTTC TGGAACAGGT TTTGCGCGTA CTTTCTCGGC ACAATATCAC
CAGGCAAATT CAAAAGAAAT TATGCATCAA TACAAGCAAG GGAATACACA GGCAGTCGTG
CATCTTGATT TGTATTGTGA TCAATTGGCG CGAGTTTGCG CAAATATAGT CAACTTTGTT
GATCCTGAAA TGATAGTACT GGGGGGTGGA ATGTCTAATA TTGATGAAAT TTATCCACTG
GTTAATGAGA AATTAAATCA GTATACCTTT ACGAAAAAAA CAGTTACCGA AATTGTTAAA
AATGTTTACG GTGATTCATC CGGTGTCCGG GGGGCTGCTT TTTTGCATCT GCAGGGATAA
 
Protein sequence
MILGLDIGGT KIEGVGLDSV TYETLVTYRN VTYTKTYKGF LLSVISVIDE VAKYGNIESI 
GIGCCGSVDK AGLMQGANLL ILNGQDFIGD IKNKSNVPVA IANDADCLAL SEFKDGAAKE
AQNSCVAIIL GTGCGSGLII HNKLVTGLNN LGGELGHSPL PNYLAEVDGP EVFCYCGSKN
CTETFVSGTG FARTFSAQYH QANSKEIMHQ YKQGNTQAVV HLDLYCDQLA RVCANIVNFV
DPEMIVLGGG MSNIDEIYPL VNEKLNQYTF TKKTVTEIVK NVYGDSSGVR GAAFLHLQG