Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1702 |
Symbol | |
ID | 4626456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 2077076 |
End bp | 2077975 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639796887 |
Product | ROK family protein |
Protein accession | YP_943089 |
Protein GI | 119945409 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0394956 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCTGG GATTAGATAT TGGTGGAACA AAAATTGAAG GTGTTGGTCT TGATTCAGTG ACATACGAAA CACTGGTTAC TTATCGCAAT GTGACTTATA CAAAGACTTA TAAGGGTTTC TTGTTGTCGG TAATATCAGT CATTGATGAA GTGGCAAAGT ACGGTAATAT TGAATCTATT GGTATAGGTT GTTGCGGTTC GGTGGATAAA GCTGGACTAA TGCAGGGGGC AAACCTACTC ATTTTAAATG GTCAAGATTT TATTGGTGAC ATCAAAAATA AGAGTAACGT ACCTGTTGCA ATCGCTAATG ATGCTGACTG TTTGGCACTT TCTGAATTTA AAGATGGAGC AGCGAAAGAG GCACAGAATT CATGTGTTGC AATTATTCTT GGTACGGGTT GTGGTTCAGG TCTAATTATT CACAATAAAC TGGTTACTGG CTTGAATAAT TTGGGCGGAG AACTAGGACA TAGTCCGCTA CCAAATTATT TAGCAGAAGT AGACGGTCCG GAAGTATTTT GCTACTGCGG ATCTAAAAAC TGTACTGAAA CATTCGTTTC TGGAACAGGT TTTGCGCGTA CTTTCTCGGC ACAATATCAC CAGGCAAATT CAAAAGAAAT TATGCATCAA TACAAGCAAG GGAATACACA GGCAGTCGTG CATCTTGATT TGTATTGTGA TCAATTGGCG CGAGTTTGCG CAAATATAGT CAACTTTGTT GATCCTGAAA TGATAGTACT GGGGGGTGGA ATGTCTAATA TTGATGAAAT TTATCCACTG GTTAATGAGA AATTAAATCA GTATACCTTT ACGAAAAAAA CAGTTACCGA AATTGTTAAA AATGTTTACG GTGATTCATC CGGTGTCCGG GGGGCTGCTT TTTTGCATCT GCAGGGATAA
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Protein sequence | MILGLDIGGT KIEGVGLDSV TYETLVTYRN VTYTKTYKGF LLSVISVIDE VAKYGNIESI GIGCCGSVDK AGLMQGANLL ILNGQDFIGD IKNKSNVPVA IANDADCLAL SEFKDGAAKE AQNSCVAIIL GTGCGSGLII HNKLVTGLNN LGGELGHSPL PNYLAEVDGP EVFCYCGSKN CTETFVSGTG FARTFSAQYH QANSKEIMHQ YKQGNTQAVV HLDLYCDQLA RVCANIVNFV DPEMIVLGGG MSNIDEIYPL VNEKLNQYTF TKKTVTEIVK NVYGDSSGVR GAAFLHLQG
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