| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1699 |
|---|
| Symbol | |
|---|
| ID | 4626453 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 2073841 |
|---|
| End bp | 2074791 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639796884 |
|---|
| Product | fused adenylate cyclase and hybrid sensor diguanylate cyclase and response regulator |
|---|
| Protein accession | YP_943086 |
|---|
| Protein GI | 119945406 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain
[COG2203] FOG: GAF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.481687 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAC CTGATATTCC TCAAGATGAA GGGGGGCGCC TCAAAGCACT TCGTTCGCTT
GATGTATTAG ATACCCCTTC AGAGGAACGT TTTGATCGTC TAACACGGTT AGCAAAACGT
ATGTTTGACG TGCCAATAGC ACTCGTAAGT CTTGTCGATG AAAACCGACA GTGGTTCAAA
TCCTGCACAG GTATTAATGT TAGTGAAATA CCACGTGATA TTTCATTTTG CGGGCATGCG
ATTCTCGAAA ATGAAATATT TATAATTCCT GACACGATAA AAGATGAACG TTTTTCGGAT
AACCCATTGG TGTTGAATGA GCCATATATT CGCTTTTACG CAGGATGCCC GCTACGTTAT
TTGGACGGTA GCACGTTGGG CACATTGTGC ATTATCGACA CACAACCCAG AGTTCTTGAC
GAAGAGGACC TTGATGCATT GAAGGATCTC GCGGAATTAG CAGAACACGA ACTTATGGCT
GTTCAGCTAG CAACTCAGGA TGAGCTTACA AAGCTCTCCA ACAGGAGAGG CTTTATTAAA
CTTGCACAAC ATGGACTGGA TATATGCGCT CGTCATAATA TCTCTGCCTC ACTTGTGTTT
TTTGATCTAA ATAAATTCAA ATCGATCAAT GATACATTTG GACATGCTGA AGGTGATGCA
GCATTACTCG CTTTTTCCGA TCATATGAAA AATACTTTCA GAGATTCGGA CATCATTGGT
CGTTTAGGTG GTGACGAGTT CGCCGTGCTA TTAACTGATA CATCACTCGA ACCTGCTGAA
AAAACCATTT CACGGTTTCG GAGTTCCATA GAACATTACA ATAAAGAATC TAATCTAGGC
TATGAGATCT CATTTAGCGA GGGTATTGTA GAAATCGATC ATGAAAAAAA TATTTCTCTT
GAATCATTAT TGGGCCAGGC CGATTCTTTA ATGTACGATA ATAAACTTTA A
|
|---|
| Protein sequence | MKKPDIPQDE GGRLKALRSL DVLDTPSEER FDRLTRLAKR MFDVPIALVS LVDENRQWFK
SCTGINVSEI PRDISFCGHA ILENEIFIIP DTIKDERFSD NPLVLNEPYI RFYAGCPLRY
LDGSTLGTLC IIDTQPRVLD EEDLDALKDL AELAEHELMA VQLATQDELT KLSNRRGFIK
LAQHGLDICA RHNISASLVF FDLNKFKSIN DTFGHAEGDA ALLAFSDHMK NTFRDSDIIG
RLGGDEFAVL LTDTSLEPAE KTISRFRSSI EHYNKESNLG YEISFSEGIV EIDHEKNISL
ESLLGQADSL MYDNKL
|
|---|
| |