| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1687 |
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| Symbol | pfaD |
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| ID | 4627175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 2059702 |
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| End bp | 2061297 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639796876 |
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| Product | polyunsaturated fatty acid synthase PfaD |
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| Protein accession | YP_943078 |
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| Protein GI | 119945398 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | [TIGR02814] PfaD family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCTT TAGGTTTTAA TACAGACAAT CAAATTAACT GGGTATGGAA AGTCAGTCCG
GCAACCATAA ACAGTGATCC GCAGGCTATT AAAGATTGCT TAATGGATTT GCACAAACCC
GTCTACCTTG TACAACAGGC TGAAAGTTTA GGGGTAAGTC AGCAGATTGA CGCCGATGGC
AGTGAGGCAG TACTCGCCTT TGCACAGGCG CTTAATCCGG AAGATCTCGG CGATCCGGCC
TTTAAGAAGA GCTACGGTCT AAAATATGCC TATCACGGCG GGGCGATGGC CAATGGTATC
TCTTCCGTAG AATTAGTCAA GGCCCTCGGC AAAGCAGGAT TTTTATGCTC CTTTGGTGCG
GCGGGTTTAG TGCCCGACGC GCTTGAAAAG GCAATCAAAG CTATTCAAAC GGCCTTACCA
AACGGCCCCT TTGCGGTCAA CCTGATTCAT GCTCCCAGCG AAGAAGCCTT AGAGCGCGGC
GCCGTTGAAC GTTTTCTAAA ACTCGGTGTT AAAGTGGTCG AAGCATCGGC CTATTTAGCC
TTAACTGAGC ATATTGTCTA CTACCGTTTA GCCGGTTTAT CGGAAAATGC CGATGGCAGC
GTTAATATCG GCAACAAAGT GATTGCCAAG GTATCGCGCA CTGAAGTCGG ACGGCGTTTT
ATGGAGCCGG CACCGAAAAA GTTGGTTGAT AAATTACTTG TACAGGGCAA AATTACACCT
CTGCAGGCAG CGCTTTCAGA GCGTGTGCCG ATGGCCGACG ACATCACCGC CGAAGCTGAT
TCCGGCGGGC ACACGGATAA CCGTCCGTTT GTAACTTTGC TACCTTCTAT TATCGCTCTG
CGTGATGAAA TTCAGGAAAA ATACAATTTT TCACCTGCTC TGCGGATTGG CGCTGGTGGG
GGAATAGGTA CCCCGCAGGC AACTCTGGCG GCGTTTAATA TGGGGGCTGC CTACATTGTT
GTCGGCAGTG TTAATCAGGC CTGTATTGAA GCTGGCGCCT CGGAGCATAC GCGCAAATTA
TTAGCCGATG TTGAGATGGC CGATGTGACC ATGGCGCCCG CCGCAGATAT GTTTGAAATG
GGGGTTAAAT TACAAGTGGT TAAACGTGGC TCGATGTTTG CCATGCGCGC CAATAAACTC
TATGACTTGT ATATGGCTTA TCCGTCAATC GAAGCGATTC CAACCCTTGA GCGTGAGAAA
ATTGAAAAAC AGATTTTTCG CAAAAACTTA GATGCAGTGT GGGCAGATAC TATCGCTTTT
TTCCACGAGC GCGATCCCGC CATGCTCGAG CGCGCGCAAA CTAACCCTAA ACGTAAAATG
GCACTGATTT TCCGCTGGTA CTTAGGACTT TCATCGCGTT GGTCGAACGA AGGAGAAGCT
GGCCGTGAAA TGGATTATCA AATATGGGCA GGCCCAAGTT TAGGTGCGTT TAATAGTTGG
GTGAAGGGCA GTTATTTAGA GGACTACACA CAGCGTAAAG CGGTTGATGT GGCGCTGCAT
CTGTTAAAAG GCAGTGCCTA TTTACAACGA ATTAATCAGC TTAAACTGCA GGGCGTTACA
TTAGCGCAAA GTTTGTCGGG GTATTACCCG AGCTAA
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| Protein sequence | MSALGFNTDN QINWVWKVSP ATINSDPQAI KDCLMDLHKP VYLVQQAESL GVSQQIDADG
SEAVLAFAQA LNPEDLGDPA FKKSYGLKYA YHGGAMANGI SSVELVKALG KAGFLCSFGA
AGLVPDALEK AIKAIQTALP NGPFAVNLIH APSEEALERG AVERFLKLGV KVVEASAYLA
LTEHIVYYRL AGLSENADGS VNIGNKVIAK VSRTEVGRRF MEPAPKKLVD KLLVQGKITP
LQAALSERVP MADDITAEAD SGGHTDNRPF VTLLPSIIAL RDEIQEKYNF SPALRIGAGG
GIGTPQATLA AFNMGAAYIV VGSVNQACIE AGASEHTRKL LADVEMADVT MAPAADMFEM
GVKLQVVKRG SMFAMRANKL YDLYMAYPSI EAIPTLEREK IEKQIFRKNL DAVWADTIAF
FHERDPAMLE RAQTNPKRKM ALIFRWYLGL SSRWSNEGEA GREMDYQIWA GPSLGAFNSW
VKGSYLEDYT QRKAVDVALH LLKGSAYLQR INQLKLQGVT LAQSLSGYYP S
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