Gene Ping_1682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1682 
Symbol 
ID4627170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2040927 
End bp2041874 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content41% 
IMG OID639796871 
Producthypothetical protein 
Protein accessionYP_943073 
Protein GI119945393 
COG category[S] Function unknown 
COG ID[COG2855] Predicted membrane protein 
TIGRFAM ID[TIGR00698] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGT TGTTAAATAA TGCAAAATGG AAAAAACAAA ATCTAATTTT TATGGGTGCC 
GCAATTTTAT GTTTATCGCC CGTCGTTTCG TCCCCTATTG CATTACTTCT CGGCTTTACA
CTGGCCATGC TTGGATTAGT CCCTAAACGG ATAAATATGA ACTTATTAAC CAAAAATCTA
TTAGCCTATT CAATCATAGG GTTAGGATTT GGGATTAATT TAGATCAGGC TATTGCTGCC
AGCAAAGATG CTTTTGGTCT GATTGTATTG TCTCTGCTGA GTACCTTAAT CATTGGCTGG
CTGTTGACTA AACGCTTACG AATCAATCCA AAAACAGGTT ATTTAATTGC CTCCGGCACG
GCAGTTTGTG GCGGTAGTGC CATTGCAGCT GTCGCGCCGG CAATTAATGC GAGCAAGGAT
CAAACCTCCA TTGCACTGGC CACTGTTTTT CTGCTCAATT CAGTGGCATT ATTTTTATTC
CCCTTTATCG GCCATTTGCT GAGTATGACG CAACATGCCT TTGGGGTTTG GTGTGCAATC
GCAATCCATG ATACCTCATC GGTTGTTGGG GCAGCTTCTG CCTATGGTGA TGAAGCCTTG
TTAATCGCAA CCACACTAAA ACTGGCACGC GCCTTATGGA TTATTCCCAT TGCATTTATT
AGCGCCCTGC TTTTTAAAGG AGATAATAAG AAAATCACGG TGCCAACGTT TATTTTATTC
TACTGCCTGT CGATACTGGT CGCTTATTAT TTACCGCAAT TTTCGTCTTT ATATGAAATT
ATTTTTTCCG TTTCTAAACG TTTTCTGGTG CTGAGTTTAT TTTTAATCGG ATCTGCCATC
AGCTTTAATA AAATCAAATC TGCAGGGGCC AAGCCACTTG TTTTAGGGGT TCTTCTTTGG
ATAATAACCG CTACGGGCTC ACTGGCTTAT ATTCAGTTAC TAATGTAA
 
Protein sequence
MEKLLNNAKW KKQNLIFMGA AILCLSPVVS SPIALLLGFT LAMLGLVPKR INMNLLTKNL 
LAYSIIGLGF GINLDQAIAA SKDAFGLIVL SLLSTLIIGW LLTKRLRINP KTGYLIASGT
AVCGGSAIAA VAPAINASKD QTSIALATVF LLNSVALFLF PFIGHLLSMT QHAFGVWCAI
AIHDTSSVVG AASAYGDEAL LIATTLKLAR ALWIIPIAFI SALLFKGDNK KITVPTFILF
YCLSILVAYY LPQFSSLYEI IFSVSKRFLV LSLFLIGSAI SFNKIKSAGA KPLVLGVLLW
IITATGSLAY IQLLM