Gene Ping_1680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1680 
Symbol 
ID4627168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2038417 
End bp2039181 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content46% 
IMG OID639796869 
ProductABC transporter ATP-binding protein 
Protein accessionYP_943071 
Protein GI119945391 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGCA TTATCAGTAT TGACAATATA GTGACACGGT TTGCTGATAA GGTTGTTCAT 
GATGGCCTTA GTTTAAGCGT TCGGCACGGT GAAATATATG GCCTGCTTGG CGGCAGTGGT
TCCGGCAAAT CGACATTAAT GAAAGAGATG ATCATGTTGT TACAGCCTGC ATCAGGAAAA
ATACAGGTGC TTGGTTATGA TGTGATTAAT ATAGGCCAAG CAGAAGCTGC CGAACTGCGC
AGTCAGTGGG GGGTACTTTT TCAACAAGGG GCACTTTATT CTTCACTCAC GGTAATGGAA
AATGTGGCGA TCAGTCTGAA AGAGTATACA GCTCTGCCGG CAAAACTGAT TAGAGAGATT
GTCCATATGA AGTTAAATCT GGTTGGTCTT CCGTACCACG CTGCAGATCT CTATCCTGCT
CAGTTAAGCG GCGGCATGGT CAAGCGCGCA TCATTGGCGC GGGCTCTGGC AATGGATCCG
CGCTTATTAT TTTTAGATGA GCCCACTTCT GGACTGGATC CTATTGGTGC TGAAGAATTT
GACCATTTGA TTATTGAATT ACGGAATATG CTGGATCTCA CTATTGTGAT GGTCACCCAT
GATCTTGACT CAATCTGGAC CATTGTGGAT CGTTTTGCCG TACTGGCAAA TAAAAAAGTG
ATTGCTGAAG GTACGCTCAA AGAGGTTATA CAGCTCCCTG ATCCGGTCAT TCGGCAGTTC
TTTCGGGGAG AGCGCGGGCG CTTAAGGAAT GGTCATGGAA AGTAA
 
Protein sequence
MSSIISIDNI VTRFADKVVH DGLSLSVRHG EIYGLLGGSG SGKSTLMKEM IMLLQPASGK 
IQVLGYDVIN IGQAEAAELR SQWGVLFQQG ALYSSLTVME NVAISLKEYT ALPAKLIREI
VHMKLNLVGL PYHAADLYPA QLSGGMVKRA SLARALAMDP RLLFLDEPTS GLDPIGAEEF
DHLIIELRNM LDLTIVMVTH DLDSIWTIVD RFAVLANKKV IAEGTLKEVI QLPDPVIRQF
FRGERGRLRN GHGK