Gene Ping_1678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1678 
Symbol 
ID4626927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2036939 
End bp2037541 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content45% 
IMG OID639796867 
ProductABC-type uncharacterized transport system auxiliary component-like protein 
Protein accessionYP_943069 
Protein GI119945389 
COG category[R] General function prediction only 
COG ID[COG3218] ABC-type uncharacterized transport system, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA GAGATTTCTT TTTATTAGCG CTGTTATTGA TCGGGATAAC AGGATGTGCC 
GGCAAAAAAC TGCCTCCCGT TTCGACCTAT ACTCTTTATC CCGCGCTGGA TACTTTTTAC
CTGCCTAAGA GCCAAGAAGG AAAACCTGCC GGCATTCTTA TGTTAGGCCG AATGGGCAGT
TCGCATGTGT TTAATGCTCG AGAGATAATC TATAGCGATC AGCGCTATGG GCAGAGCAGC
TACGCTTATA GCCGCTGGAG TGATTCACCG ACCATCATGT TGCGCCTTAT TTTTCAGGAA
GCACTTGAAA AAAGCGGGCG TTATATTGCA GTTGTACCTT ACTCATCTCA GTCGAAATCT
GACTTTCTGC TCGAAAGTAC CCTGCTCGAT TTCAGCCACA GGGTAAATGA TGACGGGACC
TCCGATGGGT TGATAAAAAT CCACTTTAAC CTTATCGATA ATAATACCAG CAGAGTTATC
AAAAGCCGGA ATTTTGTGTC AAGTCTACCG GTGGCACCGC CGATCAATGC AGGTAACGCG
GTAGCCGCAC TGAATAAAGC AGCTACTATT GTGACTAAAG AACTGGTTGA CTGGCTGCGT
TAA
 
Protein sequence
MKNRDFFLLA LLLIGITGCA GKKLPPVSTY TLYPALDTFY LPKSQEGKPA GILMLGRMGS 
SHVFNAREII YSDQRYGQSS YAYSRWSDSP TIMLRLIFQE ALEKSGRYIA VVPYSSQSKS
DFLLESTLLD FSHRVNDDGT SDGLIKIHFN LIDNNTSRVI KSRNFVSSLP VAPPINAGNA
VAALNKAATI VTKELVDWLR