Gene Ping_1664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1664 
Symbol 
ID4626913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2021240 
End bp2022568 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content43% 
IMG OID639796854 
Productrecombination factor protein RarA 
Protein accessionYP_943056 
Protein GI119945376 
COG category[L] Replication, recombination and repair 
COG ID[COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0526535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGATC TTTTTGAATT TAATAATGAT TTTCAGCCAT TAGCGGCACG AATGCGGCCA 
AAATTTTTTT CAAATTACAT TGGCCAGGCA CATATTATCG GTGCCGGTAA ACCGTTACGC
AATGCATTAG AAAATGGTGC TGCGCACTCC ATGATTTTAT GGGGTCCGCC CGGTACGGGT
AAAACAACCT TAGCAGAATT AATAGCATCC TACTGTGATG CGCATGTAGA GCGTCTTTCG
GCGGTGACCT CGGGGATTAA AGAAATACGT GCTGCGATTG AAATTGCCCA ACAAAATCGC
ACTAATGGTA TTCGTACCTT GTTGTTTGTT GATGAAGTAC ATCGTTTTAA CAAGGCCCAG
CAGGATGCTT TTCTGCCCTA TATTGAAGAT GGCACTATCT TATTTATTGG TGCAACGACG
GAAAATCCTT CCTTCGAGCT CAATAATGCA TTGTTATCCA GAGCGCGGAT CTATTTATTA
AAAAAACTCA GTGAAGCTGA AATCATCGCT GTGATTGATC AGGCTTGTTC TTCAGTCGAT
GGACTCGCAA ATAAAAACAT TCAATTTGTG GGTGATGTAA AAGAAAAATT AGCGCAACTT
GTACAAGGGG ATGCCAGAAA AGCCCTTAAT TATCTCGAAT TATTGGCAGA TATGGCCATT
GATTCTGAGC AAAGTTTATC CATTAATCTA GATCTCTTAA AGGAGATAGC AGGTCGTGAA
GGGGTTAGCT TTGATAAAAA AGGGGATCTT TTTTACGATT TAATATCGGC CTTTCATAAA
TCAGTGCGTG GTTCAGATCC CGATGCTGCA CTTTATTGGT ATGCGCGTAT GCTCGCTGGT
GGATGTGATC CGCTGTATGT GGCGCGCAGG TTATTAGCAA TTGCATCGGA AGACATTGGT
AATGCCGATC CGCGGGCGAT GCAAATTGCA ATAAATGCCT GGGATTGTTT TGCCCGCGTT
GGACCCTATG AAGGTGAGCG GGCAATTGCT CAGGCGATTG TCTACTGCGC CAGTGCACCT
AAAAGTAATG CCGTCTATAC GGCCTTTGCC AATGCTAAGC AAGCGGTGAA AGATTTTCCT
GAATATGAAG TGCCATTACA TCTTCGTAAT GCACCGACTA AATTAATGAA GGAACTTGAC
CATAGTTTAG GTTATCGTTA TGCGCATGAG GAAGACGGCG CATTTGCTGC CGGTGAAGTT
TATCTGCCGG AAGCCTTACA GGGCACTAAG TTTTATCGAG CAACAGATCG TGGTTTTGAA
AAGCAAATTG CCGCCAAACT TAATTATTTA GATGAGTTAA ACCAGCAAAG TAATAATAAA
CGTTATTAG
 
Protein sequence
MKDLFEFNND FQPLAARMRP KFFSNYIGQA HIIGAGKPLR NALENGAAHS MILWGPPGTG 
KTTLAELIAS YCDAHVERLS AVTSGIKEIR AAIEIAQQNR TNGIRTLLFV DEVHRFNKAQ
QDAFLPYIED GTILFIGATT ENPSFELNNA LLSRARIYLL KKLSEAEIIA VIDQACSSVD
GLANKNIQFV GDVKEKLAQL VQGDARKALN YLELLADMAI DSEQSLSINL DLLKEIAGRE
GVSFDKKGDL FYDLISAFHK SVRGSDPDAA LYWYARMLAG GCDPLYVARR LLAIASEDIG
NADPRAMQIA INAWDCFARV GPYEGERAIA QAIVYCASAP KSNAVYTAFA NAKQAVKDFP
EYEVPLHLRN APTKLMKELD HSLGYRYAHE EDGAFAAGEV YLPEALQGTK FYRATDRGFE
KQIAAKLNYL DELNQQSNNK RY