Gene Ping_1661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1661 
Symbol 
ID4626910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2017293 
End bp2018003 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content39% 
IMG OID639796851 
Productfatty acid metabolism regulator 
Protein accessionYP_943053 
Protein GI119945373 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID[TIGR02812] fatty acid metabolism transcriptional regulator FadR 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0855025 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAAAA ACGTAAAAGG GCCTGCAGAC ATAGCTGAAC AGTATTTGAT AGAGTCTATT 
TGGAATGGCA CTATTGCAAT ACATTCAGCA TTGCCCGCTG AACGAGTGCT TGCTGATAAA
ATAGGAGTGA CGCGCACTAC TCTGCGTGAG GTTTTACAGC GTATGTCAAA GGATGGTTGG
ATTACAATTT GCCATGGTAA GTCAACGAAA GTAAATGATT TTTGGGAAAC CTCAAGTTTA
AATGTGTTAA GTACTATTAC CCGCCTTGAT ATTGAGAGGC GGGCAGATTA TATTGACCAA
CTGATGTCAG TACGTACTAA TGTTAGCGCC ATTATTTTAC GCATGGCTGC AAAGCATAAT
ACAAAAAGTG TGCTTTCTTT TTTAGATAAA GTACCTTCAA TTGATGCCAG CAGTGAAGAA
TTTACTGAAT TTGATTACCG TTTTTATCAC CATGTCGCTG TTTCCTCCAA TAATATGATT
TATGTTTTGA TTCTTAATGG GTTACAGGAC TTGTATCGCC GGGTTGGCTA TTTTTATTTT
TCAAATACAG AGGCTAAATC TATTGCTCTG GCTTTTTACG CTGACATTAA AATTGTATTA
GAGAAAGGGG AAATACATCA GATCATGCAG GTTGTTCGCG ATTCGGCTTT CGCCAGTGGA
AAAATTTGGC TGCATTTACG TCACCAGCTT CCCGATGACT TTCTGGATTA A
 
Protein sequence
MIKNVKGPAD IAEQYLIESI WNGTIAIHSA LPAERVLADK IGVTRTTLRE VLQRMSKDGW 
ITICHGKSTK VNDFWETSSL NVLSTITRLD IERRADYIDQ LMSVRTNVSA IILRMAAKHN
TKSVLSFLDK VPSIDASSEE FTEFDYRFYH HVAVSSNNMI YVLILNGLQD LYRRVGYFYF
SNTEAKSIAL AFYADIKIVL EKGEIHQIMQ VVRDSAFASG KIWLHLRHQL PDDFLD