Gene Ping_1656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1656 
Symbol 
ID4626935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2013100 
End bp2014407 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content45% 
IMG OID639796846 
Producthistidinol dehydrogenase 
Protein accessionYP_943048 
Protein GI119945368 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0141] Histidinol dehydrogenase 
TIGRFAM ID[TIGR00069] histidinol dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.554535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.968546 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACTA AGATGAGGAC AGTTAACTGG TTAGATTTAT CCAATAAGCA ACAAGCACTA 
CTGCTTACTC GTCCTGCAAT GGCGGATTCT GCCGGACTGA AAACAACCGT CTCTGAAATC
ATTTCTGATG TTCGTATTAA AGGTGATCGC GCCCTTTTAG ATTATACTAA ACGTTTTGAT
AAATTAGATG GCGAAAACTT TACCATTTCA GAAGCGCAAA TTCAGCAGGC AAGTGCACGT
TTAGGTGATG ATATTAAAAC AGCTATCCGC ACCGCTTATA ACCACGTGGT TATATTTCAT
AAGGCGCAAG TGCAGGATGT AATCCGTGTT GAAACCATGC CGGGTGTGGT TTGTGAAATG
CACACTCAAG CCATTGAATC AGTCGGTCTC TATATCCCAG GTGGCAGTGC CCCACTGCCC
TCAACGGTTA TTATGACCGG AGCACCTGCG CAAATTGCCG GTTGCAGCCG CTTAGTACTG
TGTACGCCAC CTCCCGTGGC CGATGAAATT TTATTTGCCG CCTCACTGTG CGGCGTAAAC
GAAATTTACA CTGTAGGGGG TGCACAGGCA ATTGCCGCTT TAGCCTATGG CACAGACACC
ATTGCCTCTG TTGATAAAAT TTTTGGTCCC GGCAATGCCT ATGTTACGGA AGCAAAACGT
CAGGTAAGTA ATGATTTTGC CGGTGCCGCC ATTGATATGC CGGCAGGTCC TTCGGAAGTA
CTGGTCATTG CAGATGAGAA TGCTAATCCC ACTTTTATCG CCGCAGACTT GCTCTCTCAA
GCTGAGCATG GCCATGACTC ACAATCTATA TTAGTGACTC CAAGCCTTGC TGTTGCAGAG
CAAACCGCCA TTGAGATTAA GCAACAATTA GCTGTTTTAG AACGTCGTGA CATCGCAGAA
AAGGCATTAG CACACAGTGT TAGTATCATT TGTAAAGATA TCCAGCAGGC ATGTGAAATT
TCCAATCGTT ATGCCCCGGA GCACTTGATA GTTCAAACAG CCAATCCAAG AGCTTTACAG
CCAAAACTTA AAAATGCCGG TTCCATATTC TTAGGCGCCT GGACACCTGA GTCAGTGGGC
GATTACGCCA GTGGGACAAA CCATGTTTTA CCTACTTATG GTTATACCCG TACCTATTCA
AGTTTAGGCT TAGCAGACTT TGTTAAACGT TATACTGTGC AGGAATTGAC TGAAGACGGC
TTGCTTAATT TAGCCCCTAC GGTGACCTGT CTTGCAGACG CAGAAGGGTT AACGGCGCAT
AAACGTGCTG TTACTATCCG TGTAGATAAA TTAAACAGTA CAAAATAA
 
Protein sequence
MQTKMRTVNW LDLSNKQQAL LLTRPAMADS AGLKTTVSEI ISDVRIKGDR ALLDYTKRFD 
KLDGENFTIS EAQIQQASAR LGDDIKTAIR TAYNHVVIFH KAQVQDVIRV ETMPGVVCEM
HTQAIESVGL YIPGGSAPLP STVIMTGAPA QIAGCSRLVL CTPPPVADEI LFAASLCGVN
EIYTVGGAQA IAALAYGTDT IASVDKIFGP GNAYVTEAKR QVSNDFAGAA IDMPAGPSEV
LVIADENANP TFIAADLLSQ AEHGHDSQSI LVTPSLAVAE QTAIEIKQQL AVLERRDIAE
KALAHSVSII CKDIQQACEI SNRYAPEHLI VQTANPRALQ PKLKNAGSIF LGAWTPESVG
DYASGTNHVL PTYGYTRTYS SLGLADFVKR YTVQELTEDG LLNLAPTVTC LADAEGLTAH
KRAVTIRVDK LNSTK