Gene Ping_1645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1645 
Symbol 
ID4623875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2001932 
End bp2003083 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content39% 
IMG OID639796835 
Productalcohol dehydrogenase, iron-containing 
Protein accessionYP_943037 
Protein GI119945357 
COG category[C] Energy production and conversion 
COG ID[COG1979] Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0757662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.466736 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAATT TCACCTTTTT TAATAATACA CGTATTCATT TTGGCGAAGG TCAGATTAGT 
AAAGTCACAT CTGAAATACC AAAAGACAAG AAAGTATTAG TACTTTATGG CGGGGGGTCC
ATTAAAAAAA ACGGTGTATA TGATCAGGTT AAAGCAGTTT TAGCTGATTA TAATTGGAGT
GAATTCTCAG GCATTGAGCC AAACCCTAAA TATGAGACTT TACTTAAAGC AGTCGCAATC
ATCAAAGCGG AAAATTTTGA TTATCTGTTA GCCGTTGGCG GAGGTTCCGT TGTTGATGGT
ACAAAATTTA TTGCCGCAGC TTGTAGATTT GAAGGTCCTG AGCCTTGGGA TATTTTAGAA
GCGCAAGCGG TGGTTAATAG TGCACTTACC CTAGGGTGTA TATTAACCTT GCCGGCAACA
GGATCTGAAA GTAACGGAAA CGCAGTTATT ACACGAGAAC ATAACAAACT TGCATTTAAT
TCACCACTAG TTTGCCCCGC TTTTGCTATT TTGGATCCAA CAACAACATT AAGTTTATCA
CCACGTCAGA GTGCTAATGG TGTTGTTGGA GCCTTTGTTC ACGTTATGGA GCAATACCTA
ACTTACCCGG TTAATGCAAA AGTACAAGAT CGTTTTGCAG AGGCTTTATT ATTGAATTTA
ATCGAAGAGG GTCCCAAAGT ATTAAAAACA CCGGACGATC TGGCCGTAAG ATCGAATATA
ATGTGGAGTG CAACTCAAGC ATTAAACGGT TTAATTGGTG CCGGTGTACC ACAGGACTGG
ACATCGCATG GTATTGGCCA TGAACTTACC GGTCATTATG GTATTGACCA TGCGCGTAGC
TTAAGTATTA TTTTACCCGC TGTAATGAAG ATATGTCGAA TCGAAAAAGA GGAAAAATTA
TTACAATATG GAGAAAGAGT TTTTGCTATT ACTGAAGGTG CAATAGATCA ACGCATTGAT
CAGGCAATTG CCCAAACGAT TAATTTTTTC ACCATAATGA ATGTCCCAAC AACCCTGAAT
CATGCAGGGC TCGAAAGAGC TTCGATTGAA GTTCTCTTAA ACAGCTTAAA AAAGCATGGT
ATGGTTGCAT TAGGGGAAAG TCGGAACAAT GATTTAAGCA GGTCGCGTAA AATTTTAGAA
GCAGCCCTGT GA
 
Protein sequence
MDNFTFFNNT RIHFGEGQIS KVTSEIPKDK KVLVLYGGGS IKKNGVYDQV KAVLADYNWS 
EFSGIEPNPK YETLLKAVAI IKAENFDYLL AVGGGSVVDG TKFIAAACRF EGPEPWDILE
AQAVVNSALT LGCILTLPAT GSESNGNAVI TREHNKLAFN SPLVCPAFAI LDPTTTLSLS
PRQSANGVVG AFVHVMEQYL TYPVNAKVQD RFAEALLLNL IEEGPKVLKT PDDLAVRSNI
MWSATQALNG LIGAGVPQDW TSHGIGHELT GHYGIDHARS LSIILPAVMK ICRIEKEEKL
LQYGERVFAI TEGAIDQRID QAIAQTINFF TIMNVPTTLN HAGLERASIE VLLNSLKKHG
MVALGESRNN DLSRSRKILE AAL