Gene Ping_1643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1643 
Symbol 
ID4623873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2000451 
End bp2001221 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content38% 
IMG OID639796833 
Productband 7 protein 
Protein accessionYP_943035 
Protein GI119945355 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.182156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.321181 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATTT ATAGTATAAC CGGCGGTCTG ATTTCTATTT TAGTACTGGC ATTACTCTTT 
AGTATGTTCA AAGTATTACG TGAATATGAG CGTGGTGTGG TTTATTTTCT TGGGCGTTTC
CAGGAAGTAA AAGGCCCTGG ATTAGTTATT TTAATTCCTG TTATTCAGCA AATGGTAAGA
GTTGATCTGC GGACAATTGT TTTAGATGTA CCCACTCAAG ATTTAATTAC ACGTGATAAC
GTTTCGGTTA AAGTTAATGC GGTTGTCTAT TTTCGAGTTG TTGATCCGCA GATGGCGATT
AACAATGTCG AAAGTTATTT GGAGGCAACC AGTCAATTAT CACAAACGAC CCTAAGGTCA
GTGTTAGGGC AACATGAACT TGATGAGTTA CTGGCCGAAC GGGACCGTTT GAATAAAGAT
ATACAAGTTA TTTTGGATAA ACAAACGGAC AATTGGGGTA TAAAAATAGC AACTGTTGAA
GTTAAACATG TGGATCTTGA TGACAGTATG ATTCGTGCTT TAGCCAAACA AGCAGAGGCC
GAGCGTGTCA GACGGGCAAA AGTTATTCAT GCAACGGGTG AATTTGAAGC ATCTGAAAAA
TTACAGCAGG CTGCAATGGT TTTAAGTAAA GCGCCTAATG CGATGCAGTT AAGATATATG
CAGACGTTAA CTGAAATTGC TAATGAGAAA ACCTCCACGA TTATCTTTCC GATGCCGATT
GATTTGTTGG ATAATTTAAA AGCGTTAGTT AAAGAAAAAG ATACCAATTA G
 
Protein sequence
MMIYSITGGL ISILVLALLF SMFKVLREYE RGVVYFLGRF QEVKGPGLVI LIPVIQQMVR 
VDLRTIVLDV PTQDLITRDN VSVKVNAVVY FRVVDPQMAI NNVESYLEAT SQLSQTTLRS
VLGQHELDEL LAERDRLNKD IQVILDKQTD NWGIKIATVE VKHVDLDDSM IRALAKQAEA
ERVRRAKVIH ATGEFEASEK LQQAAMVLSK APNAMQLRYM QTLTEIANEK TSTIIFPMPI
DLLDNLKALV KEKDTN