Gene Ping_1629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1629 
Symbol 
ID4623859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1987142 
End bp1988425 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content41% 
IMG OID639796822 
Producturacil-xanthine permease 
Protein accessionYP_943024 
Protein GI119945344 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2233] Xanthine/uracil permeases 
TIGRFAM ID[TIGR00801] uracil-xanthine permease 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0348661 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCTC GTACCGATTC TGAATTGGGA ACACCAGAAA AAGAAATAGT TGAGGACGTG 
ACTGCTGACT TTAATGCATT TCAGCAAGCC TTGGCTGGAT CACAAATGTT ATTTGTAGCA
TTTGGTGCCT TAGTATTAAT GCCATTAATC ACTGGACTTG ATCCAAATGT TGCCTTATTT
ACGGCTGGTA TTGGTACTTT ATTATTCCAT TTAGTGACCA AAGGGAAAGT GCCAATATTT
TTGGCATCTT CATTCGCCTT TATTGCTCCC ATTGCTTATG GCATTCAAAC CTGGGGAATT
CCCGGTACTA TGTCGGGATT ATTTGTAGCT GGCCTTGTTT ATATGCTGAT GTCATATGCG
GTTAAACTTC GTGGTGTTGA TTTTATTCAT CGCTTATTAC CGCCTGTTGT TGTTGGACCC
GTGATCATGG TGATTGGTTT AAGCCTTGCG CCTGTTGCTG TGAATATGGC ACTGGGTAAA
GCGGGTGATG GTAGTTTTGT TTTAATAGAA CAAAATACAG CAATGATCAT CTCTTTCTCT
TCACTTATCT GCACTTTATT AGTGGCGACT AAAGCGAAAG GCGTTTTTAA ATTACTGCCT
ATTCTCTCAG GGGTCGTGCT TGGCTATAGC CTGTCATTGT TCTTTGGCGT GGTTGATTTC
AGTCCGGTCG GTAATGCAGC TTGGTTGAGT ATACCCAACT TTGTCGCGCC GGAATGGAAC
TGGCAAGCTG TCTTATTTAT GATTCCGGTG GCAATTGCCC CCGCAGTTGA ACATGTTGGC
GATATTCTTG CTATTAGTAA TGTAACGGGT AAAGATTTTT TGAAAAAACC AGGTCTACAT
CGTACTTTGT TTGGTGATGG TCTGGCGACT AGTGCTGCTT CATTATTTGG CGGCCCCCCT
AATACGACTT ATTCAGAGGT AACCGGTGCG GTTATGTTAA CCCGTAACTT CAATCCTAAA
ATAATGATTT GGGCTGCTGT TATTGCTATT TTATTAGCTT TTATCGGAAA ATTTGGAGCC
ATATTACAAA CTATTCCTTC GGCTGTGATG GGGGGAATTT TAATCTTATT ATTTGGGACT
ATTGCGTCTG TTGGATTAAA TACGTTAATC CGTCATCAAG TTGATCTCTC CAATTCGCGT
AATTTATGCA TTGTCTCTGT CGTTTTAGTT TTTGGAATCG GTGGAATGGC TTTTGATTTT
GGTGATTTTA GCCTGCAAGG GGTCAGTTTA TGCGCGCTTG TTGCAATATT TCTAAATATG
GTTTTACCCA AGACAAAATC ATAA
 
Protein sequence
MTARTDSELG TPEKEIVEDV TADFNAFQQA LAGSQMLFVA FGALVLMPLI TGLDPNVALF 
TAGIGTLLFH LVTKGKVPIF LASSFAFIAP IAYGIQTWGI PGTMSGLFVA GLVYMLMSYA
VKLRGVDFIH RLLPPVVVGP VIMVIGLSLA PVAVNMALGK AGDGSFVLIE QNTAMIISFS
SLICTLLVAT KAKGVFKLLP ILSGVVLGYS LSLFFGVVDF SPVGNAAWLS IPNFVAPEWN
WQAVLFMIPV AIAPAVEHVG DILAISNVTG KDFLKKPGLH RTLFGDGLAT SAASLFGGPP
NTTYSEVTGA VMLTRNFNPK IMIWAAVIAI LLAFIGKFGA ILQTIPSAVM GGILILLFGT
IASVGLNTLI RHQVDLSNSR NLCIVSVVLV FGIGGMAFDF GDFSLQGVSL CALVAIFLNM
VLPKTKS