Gene Ping_1628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1628 
Symbol 
ID4623858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1986264 
End bp1986890 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content40% 
IMG OID639796821 
Producturacil phosphoribosyltransferase 
Protein accessionYP_943023 
Protein GI119945343 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0035] Uracil phosphoribosyltransferase 
TIGRFAM ID[TIGR01091] uracil phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.741062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0335105 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTAA TTGAAGTAAA GCATCCGCTG ATTCAACACA AAATAGGCTT GATGCGTGAA 
GCTGACATTA GTACTAAACG TTTTCGCGAA ATAGCGCGCG AAGTTGGCAG TTTACTAACT
TATGAAGCGA CCAAAAATCT GGAACTTGAA ACAGTCAAAA TTCAAGGTTG GAATGGAGAA
GTAGAAGTAC AGCAGATTAA AGGTAAAAAA GCGACTGTGG TACCTATCTT GCGTGCTGGT
TTAGGTATGA TGGATGGCGT GTTGGAACAT ATGCCAAGCG CAAAAATTAG TGTTGTTGGT
ATTTATCGCG ATGAAAAAAC CCTAGAGCCG GTGCCTTATT TTCAAAAATT AGTGAGCAAT
ATTGATGAAC GGTTAGCCAT TGTTGTTGAT CCCATGCTTG CGACGGGTGG ATCTATGATT
TCCACCATTG ATTTAATCAA AAAAGCTGGG TGTACTAGAA TTGTTGTACT TGTTTTAGTG
GCTGCACCAG AAGGTTTAAA AGCATTAGAA GCCGCACATC CTGATCTTGA AGTTTACACC
GCGTCTATTG ATGATCACTT AGATGAACAG GGTTATATTG TACCTGGTCT TGGTGATGCT
GGTGATAAAA TTTTTGGTAC AAAATAA
 
Protein sequence
MKVIEVKHPL IQHKIGLMRE ADISTKRFRE IAREVGSLLT YEATKNLELE TVKIQGWNGE 
VEVQQIKGKK ATVVPILRAG LGMMDGVLEH MPSAKISVVG IYRDEKTLEP VPYFQKLVSN
IDERLAIVVD PMLATGGSMI STIDLIKKAG CTRIVVLVLV AAPEGLKALE AAHPDLEVYT
ASIDDHLDEQ GYIVPGLGDA GDKIFGTK