Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1627 |
Symbol | |
ID | 4623621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 1984817 |
End bp | 1986034 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639796820 |
Product | Rh family protein/ammonium transporter |
Protein accession | YP_943022 |
Protein GI | 119945342 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0004] Ammonia permease |
TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.433949 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0709779 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTTAA TACAAAATCA TGTTACTGCA TTAGTCAGTA GTGCAGATAC GTTATTTATT TTATTGGGTG CAATCATGGT ATTTGCCATG CATGCAGGAT TTGCTTTTTT GGAAGTTGGC ACTGTGCGCC ATAAAAACCA GGTGAACGCG TTAGTTAAAA TTATGTCTGA CTTTGGGATT TCAGCATTAG TTTATTTTTT CTTTGGTTAT TGGCTGGCTT ACGGTGTTAC CTTTTTTGAT AGTGCCGCGA TATTAGCTGA AAATAATGGT TATGAATTGG TTAAATTCTT TTTCTTAATG ACCTTTGCTG CCGCAATACC GGCGATTATC TCAGGTGGTG TTGCTGAGAG AGCTAAATTT AATCCCATGC TAATTGCAGC TGCGTTATGT GTTGGTCTGG TTTATCCTTT CTTTGAAGGC CTTATTTGGA ACGGTAATTA TGGATTCCAA GATTGGTTAG CGGCGAACTT TGGTGCGGTA TTCCACGATT TTGCCGGCTC AATTGTTGTA CATGCTGTGG GTGGGTGGAT TGCATTTACT GCCATTATTG TTTTGGGCAG TCGTAATGGC CGTTATCGTG CTGGCAGATT AGTGGCTTTT GCACCCTCTA ATATTCCCTT ATTAGGACTT GGTGCTTGGA TTTTATCCGT TGGCTGGTTC GGTTTTAACG TTATGTCTGC TCAAGCTATT GAAGGTATTA GTGGTTTAGT TGCAATGAAC TCTTTAATGG CGATGGTTGG CGGCATTATT AGTGCACTCG TTATTGGTAA AAAAGATCCG GGTTTTATCC ACAATGGTCC ATTAGCCGGA CTCGTCGCAG TCTGTGCTGG TTCCGATATA ATGCACCCAA TGGGCGCATT GGTGACAGGT TTAGTGGCTG GTGGTTTGTT TGTATGGTTA TTCACTTACG TACAAAAAAA ATATACCAGT TTTGACGATG TATTGGGTGT GTGGCCTTTA CATGGTGTTT GCGGCTTATG GGGCGGTATC TCCGCAGGTA TTTTTGGTCT GGAAATCTTT GGTGGTTTAG GTGGTGTCAG TTTTGCAAGT CAATTAATAG GCTCGTTTGC CGGTGTCTCA GTCGCGCTGA TTGGCGGTTT TGCTGTCTAC AAACTCGTTA ATCACTTTAT GCCCATTCGC CTCTCTGAAG AAGAAGAATT CAATGGGGCA GATGTTTCAA TACATAAAAT TGGTGCAACT AATGTAAACA ACCAATAA
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Protein sequence | MDLIQNHVTA LVSSADTLFI LLGAIMVFAM HAGFAFLEVG TVRHKNQVNA LVKIMSDFGI SALVYFFFGY WLAYGVTFFD SAAILAENNG YELVKFFFLM TFAAAIPAII SGGVAERAKF NPMLIAAALC VGLVYPFFEG LIWNGNYGFQ DWLAANFGAV FHDFAGSIVV HAVGGWIAFT AIIVLGSRNG RYRAGRLVAF APSNIPLLGL GAWILSVGWF GFNVMSAQAI EGISGLVAMN SLMAMVGGII SALVIGKKDP GFIHNGPLAG LVAVCAGSDI MHPMGALVTG LVAGGLFVWL FTYVQKKYTS FDDVLGVWPL HGVCGLWGGI SAGIFGLEIF GGLGGVSFAS QLIGSFAGVS VALIGGFAVY KLVNHFMPIR LSEEEEFNGA DVSIHKIGAT NVNNQ
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