| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1623 |
|---|
| Symbol | |
|---|
| ID | 4623609 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 1976194 |
|---|
| End bp | 1978254 |
|---|
| Gene Length | 2061 bp |
|---|
| Protein Length | 686 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639796809 |
|---|
| Product | methionyl-tRNA synthetase |
|---|
| Protein accession | YP_943019 |
|---|
| Protein GI | 119945339 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG0073] EMAP domain
[COG0143] Methionyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.161995 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATTC AACAACGTAA AATCCTTGTT ACCTGCGCCC TACCCTATGC AAACGGTCCG
ATTCATCTCG GACACATGCT TGAACATGTT CAAGCTGATA TCTGGGTTCG TTTTCAGCGT
TTACGTGGTC ACAATATCCA TTTTATTTGT GCAGATGATG CGCACGGCAC ACCTATTATG
CTTAAAGCAC AAGAGATGGG TATTAAGCCG ACCGATATGA TAGCGGACAT TCGAGCTTCT
CACGAAAGTG ATTTTTCCGG GTTTAATATT AGCTTTGATA ACTACCACAG CACCCATAGC
GAAGAGAACC AGGCGTTGTC TTCACAAATT TATATCGCAC TACGTGAAAA TGGTTATATT
ACCAATAGAA CTATCTCACA ATTATTTGAT CCTGAAAAAA AGATGTTTTT ACCGGACCGT
TTTGTCAAAG GGACCTGTCC TGACTGTAAA GCTGACGATC AATACGGCGA TAATTGTGAC
GCTTGTGGCG CAACGTATAG CCCAACAGAG ATGATTAACC CCAAATCAGC GGTTTCAGGC
AGCACGCCCA TTATGAAAGA CACTGAGCAT TTCTTTTTCG ATCTGCCGCA ATTTGAAGAT
ATGTTAAAAG TCTGGACTAA ATCAGGTGCG CTACAGACAG AGATGGCAAA TAAAGTCGGT
GAATGGTTTG AAACCGGTCT AAAGCAGTGG GATATTACCC GTGATGCGCC TTACTTTGGT
TTTGAAATAC CCGATGCACC GGGTAAATTT TTCTATGTTT GGTTAGACGC ACCGATTGGT
TACATGGGCA GCTTTAAAAA CCTCTGTGAT AAAACCGAGG GACTTAACTT TGATGATTAT
TGGAAAAAAG ACAGCGCAGC TGAGTTATAC CATTTCATCG GTAAAGACAT TGTTAACTTC
CACAGCCTAT TTTGGCCAGC TGTTTTAGAA GGTGCCGGAT TCCGTAAACC AACGGCTGTT
AATGTACACG GTTATGTCAC AGTAAATGGC GCGAAAATGT CAAAATCTAA AGGCACTTTC
ATTAAAGCCA GCACCTACTT AGATAACCTG GATCCTGAGT GTTTACGTTA TTATTATGCA
GCTAAATTAA CCAGTCGCAT TGACGATTTA GATTTAAACC TTGAAGATTT TACACAGAGG
GTAAACTCCG ATGTGGTTAA CAAACTGGTT AATCTTGCAT CACGTACAGC GGGTTTTATT
ACTAAAAAAT ACGATGGTCA ATTATCAAAC CATGTTTCTG AACCGCAGTT ATATCAATCA
TTTATTGATG CAGGGACAAG CATTGCAGCA TTATTTGAAC AACGTGATTT TGCCCGTGCG
ATTCGTGAAA TAATGGCATT GGCTGATATC GCTAACAAAT ACATTGATGA AAAAGCACCC
TGGGCATTAG CGAAACAGGA AGGCAGCGAA GTGAAAGTGC AGGAGATCTG CTCAATGGGG
ATCAACTTAT TCCGTGTTCT AATGACTTAT CTAAAACCTA TTATCCCAAA ACTGGCGGCA
CGCAGTGAGG ACTTTCTGGC GGAAACACTG GATTGGGAAA TCATTAAAAA GCCTCTTGCC
GGTCACCGCA TCAATAAATT CAAAGCGTTA TTCCAACGTA TTGATCCTAA ACATGTAGAA
GCCATGGTTG ACGCATCGAA AGACAGTCTG GAAGCGGATA AAGCTGCCAA GCAGAAACAA
GCAGCAGCAC AACTTGATGC TGCAAAATCA GAACTGGATA AAGAGCCGCT GGCACCGGAA
ATTGACTTTG ATACTTTTGC TAAAACAGAC TTACGTGTCG CTCTAATCAC AAAAGCGGAA
GCAGTACCTA AGGCTAACAA ATTACTTAAA CTAACCTTAG ATTTAGGCGG CGAAACACGC
ACAGTATTCG CCGGTATTAA GTCAGCCTAT ACGCCTGAAG AATTAGAGGG CAGGTTAACG
GTCATGGTTG CGAACTTAGC GCCACGTCAA ATGAAGTTCG GTTTATCAGA AGGCATGGTA
TTAGCAACGG GTCCTGGCGG TAAAGAGATC CACATTCTAA ATCCAGATGA TGGTGCAAAA
CCGGGCCAAC GTATAATGTA A
|
|---|
| Protein sequence | MEIQQRKILV TCALPYANGP IHLGHMLEHV QADIWVRFQR LRGHNIHFIC ADDAHGTPIM
LKAQEMGIKP TDMIADIRAS HESDFSGFNI SFDNYHSTHS EENQALSSQI YIALRENGYI
TNRTISQLFD PEKKMFLPDR FVKGTCPDCK ADDQYGDNCD ACGATYSPTE MINPKSAVSG
STPIMKDTEH FFFDLPQFED MLKVWTKSGA LQTEMANKVG EWFETGLKQW DITRDAPYFG
FEIPDAPGKF FYVWLDAPIG YMGSFKNLCD KTEGLNFDDY WKKDSAAELY HFIGKDIVNF
HSLFWPAVLE GAGFRKPTAV NVHGYVTVNG AKMSKSKGTF IKASTYLDNL DPECLRYYYA
AKLTSRIDDL DLNLEDFTQR VNSDVVNKLV NLASRTAGFI TKKYDGQLSN HVSEPQLYQS
FIDAGTSIAA LFEQRDFARA IREIMALADI ANKYIDEKAP WALAKQEGSE VKVQEICSMG
INLFRVLMTY LKPIIPKLAA RSEDFLAETL DWEIIKKPLA GHRINKFKAL FQRIDPKHVE
AMVDASKDSL EADKAAKQKQ AAAQLDAAKS ELDKEPLAPE IDFDTFAKTD LRVALITKAE
AVPKANKLLK LTLDLGGETR TVFAGIKSAY TPEELEGRLT VMVANLAPRQ MKFGLSEGMV
LATGPGGKEI HILNPDDGAK PGQRIM
|
|---|
| |