| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1616 |
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| Symbol | pspC |
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| ID | 4624645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 1970912 |
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| End bp | 1971322 |
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| Gene Length | 411 bp |
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| Protein Length | 136 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 639796802 |
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| Product | phage shock protein C |
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| Protein accession | YP_943012 |
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| Protein GI | 119945332 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1983] Putative stress-responsive transcriptional regulator |
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| TIGRFAM ID | [TIGR02978] phage shock protein C |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0788963 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.377929 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATAAGA AAAGACTCCA TCGTGATCCT AAAAATGCCA AGTTAGGAGG TGTATGCGCC
GGAATAGCAG AGTATTTTGA GATTGAAGTA TGGTTTGTCC GGTTATTAGT GGTATCAGCC
TTTTTATTTA CCGCAGGATT TATTGTGTTT CTCATCTATA TTGTGGCTTA TTTTACGCTA
GATGAAATGC CGGAAAAGCA ACAGTGGCAA CAAAATGCCT ATAAAAAGCA TAAGGTAAAA
AAGAAAGCTT GGCAGACAGG TGATTCTGCA CAGCAAATAT TAGAAGATAT CAGCATTGAA
TTAGATAAAA TGCAGAAAAA TATTGAGCAG ATGGAAGACT ATGTAACCTC ATTAGAATAC
AAAATAAATC GTGAATTTAA AAATAAAAAT AAAAATAATA AAACCAAGTA G
|
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| Protein sequence | MNKKRLHRDP KNAKLGGVCA GIAEYFEIEV WFVRLLVVSA FLFTAGFIVF LIYIVAYFTL
DEMPEKQQWQ QNAYKKHKVK KKAWQTGDSA QQILEDISIE LDKMQKNIEQ MEDYVTSLEY
KINREFKNKN KNNKTK
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