Gene Ping_1613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1613 
Symbol 
ID4624642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1966609 
End bp1967706 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content41% 
IMG OID639796799 
Productputative RNA 2'-O-ribose methyltransferase 
Protein accessionYP_943009 
Protein GI119945329 
COG category[R] General function prediction only 
COG ID[COG2933] Predicted SAM-dependent methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.09552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.605694 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGGAA TTTTATTATA TTGTCGCCCG GGGTTTGAAA ACGACTGCGC TAATGAGCTG 
CAGGACAAAG CAACGGCATT AGAAGTCTTT GGTTTTGTGA AAACAAAACG TAATAGCGGT
TATGTTTTCT ACCAGTGTTA TGACCCACAA CAGGTGGAAT ATTTATTAGA AAAGCTTGAT
TATAAACAGC TGATATTTGC ACGGCAGTTG ATTGCAGTTA AAGCCTTTAT TAATGATTTA
CCACTGGACG ACCGCATTAG TCCTATTTTA GAAATTACGC GTAATCTGCC ATTAGGTGGC
GATCTTTATG TTGAAACACC TGAGGGTGAC GATACTAAAC CACTATTAAC TTTTTGCCGC
AAATTTACAG TGCCTTTGCG TCAGGCATTA AGAAAACATA ATAGCCTCAC CGCAAAAGAA
AACCGCAATA AAATTTTTTA TCATTTATGT TTTTTGGATA ATAAATCTGC TTATATCGGT
TTTTCTGTGC CGCATAACCG GAGTGAATTT TATATGGGGA TCCCCCGTTT ACGTTCACCA
AGTGAAGCAC CCAGTCGTTC TACATTAAAG CTTGATGAAG CTATTCAGGT TTTTCTTACG
GCGGAAGAAC AGCAAGAGCG CTTACATTCA GGAATGCGTG CGGTCGATTT AGGTGCCTGT
CCCGGTGGCT GGACATACCA GCTTGTTCGC CGTGGTTTAT TTGTGACTGC TATTGATAAT
GGTGCTATGG CACAAAGCCT GATGGATACC GGTCAAGTTA CTCATTATAC GGTTGACGGG
TTTAAATATG AACCTGAGCG TAAGAACATA GACTGGCTGG TCTGTGACAT GATAGAGAAA
CCCAAGCGTG TGGCTAAATT GATGGGGCAA TGGTTAATTG ACGGCTGGTG TAAAGAAGCT
ATTTTCAACT TTAAATTGCC CATGAAAAAA CGTTATCAGG AAGCCTCTGA AGATATTAAA
ATATTAACCG ATATGTTCGA AAAGGAAGAT CTTCAGTATG AACTGCAAGC GAAGCAGCTT
TATCATGATC GTGAAGAGAT AACCCTGCAT GTGCGTTTAA TCGGTAATCA CTGGGGTAAA
CAACTGGGTA ACGGATAA
 
Protein sequence
MLGILLYCRP GFENDCANEL QDKATALEVF GFVKTKRNSG YVFYQCYDPQ QVEYLLEKLD 
YKQLIFARQL IAVKAFINDL PLDDRISPIL EITRNLPLGG DLYVETPEGD DTKPLLTFCR
KFTVPLRQAL RKHNSLTAKE NRNKIFYHLC FLDNKSAYIG FSVPHNRSEF YMGIPRLRSP
SEAPSRSTLK LDEAIQVFLT AEEQQERLHS GMRAVDLGAC PGGWTYQLVR RGLFVTAIDN
GAMAQSLMDT GQVTHYTVDG FKYEPERKNI DWLVCDMIEK PKRVAKLMGQ WLIDGWCKEA
IFNFKLPMKK RYQEASEDIK ILTDMFEKED LQYELQAKQL YHDREEITLH VRLIGNHWGK
QLGNG