Gene Ping_1603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1603 
Symbol 
ID4624632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1959042 
End bp1959479 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content36% 
IMG OID639796789 
Productcyclase/dehydrase 
Protein accessionYP_942999 
Protein GI119945319 
COG category[I] Lipid transport and metabolism 
COG ID[COG2867] Oligoketide cyclase/lipid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.555415 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAGG TATCTCGTAG TGCGTTACTC ATGTACAGCG CCGAAGAAAT GTATCAATTG 
GTTAATGACG TGAATGCTTA TCCTGAATTT TTACCGGGCT GTGTTGATGC TAATATATTA
ACCAACAATA ATAATGTCAT GCGCGCTTCA GTTGAAGTGT CAAAAGCTGG TATTAGCCAA
ACTTTTACCA CAGAAAATAT TTTAGTAAAT GGTCAAAGCA TTTTAATGAA TTTAGTCGAC
GGCCCTTTTA AACATTTAAA AGGTGGCTGG ACATTTTCTA AACTCGATGA ACAGGCCTGT
AAGATAAATT TAGATTTAGA GTTTGAATTT AATAGTTCAC TGGCTGAACT TGCATTTGGT
CGGATTTTTA ATGAGTTAGT GGGTTCAATG GTGAAATCTT TTTCTAGCCG TGCAAAAGTA
GTTTATGGAA TACGATAG
 
Protein sequence
MAQVSRSALL MYSAEEMYQL VNDVNAYPEF LPGCVDANIL TNNNNVMRAS VEVSKAGISQ 
TFTTENILVN GQSILMNLVD GPFKHLKGGW TFSKLDEQAC KINLDLEFEF NSSLAELAFG
RIFNELVGSM VKSFSSRAKV VYGIR