Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1589 |
Symbol | |
ID | 4625386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 1943988 |
End bp | 1945001 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639796776 |
Product | CRISPR-associated Cse4 family protein |
Protein accession | YP_942986 |
Protein GI | 119945306 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01869] CRISPR system CASCADE complex protein CasC/Cse4 |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.466428 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.48477 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACGT TTATTAATAT TCATACCCTT ATTTCTCATC CATCATCGAT GATGAATCGT GATGATTCAG GCATGCAAAA AACCGCTGTT TTTGGTGGTA GTGTACGCAG TCGTATTTCC AGCCAATGTT TAAAGCGTGC TATTCGCCAA AGCGATATTT ATGGAGAAGC AGTTGCTGAA AAGTCTATTC GTACCAATAA GTTTGATGAA TTGTTAGATC TATGCAAAGA AGCAATGCCT GAAACTGATA TTAAACTAAT TGAAGATGTG TTGTTAAACA TGGGTTCGAA AGTAACTAAA GATAAGAAAA CTGAGATACG CAATTTCGAT GCTGTTCAAC CTTATGCAAT AGGCTCAATA CGTGAAGCCA TTAATATGGT GAATGAAGGA ACTGAATTAA AAGATCTTAA AAAAATTGTG CAAATCCCAA CCATTGATGT GGCGTTGTCA GGTCGGATGG ATGCTAGCTG CCCACCGCGA AATGTTGAAG CGGCAATGAG TGTGGCACAC AGCTTAACCA CGCACAGCGC GGATATTGAA GTAGATTGGT TTACCGCCTG TGATGATTTA GCAGAGCAAG GCTCCGGACA TATAGGGACA ACGGAATTCA GCTCGGGCGT ATTTTATCGT TATGCGTCAA TCAATGTTGA TTTATTGGCA AAAAATGTTA AATCCACTGT GAGTGAAGTA ACACCCATTA TTAATACTAT GATCCGCTGT TTTGCTCAGG TATCACCTAG CGCCAAGCAA AAAGTATTTG CAGCCTACAA TCAAGCTGAT TTTGTGATGG CCACACATTC CAACCAGCCG ATTTCCCTTG CCAATGCATT TAGAAAACCG ATTGAAAATA ATGGTGATGT GATGGAAAAC TCGATCGCTG CGTTAGTGAA ACATTATGAA AAGCTCACCA ATGCTTATGA GCTTGACTCA AAAGCGATAG CACTCGATTT AACCGATAGT GCGCAAAGTA AACAAATCAA TTTGGTTAAC AAAATCAGTG ATATTCGTTT TTAA
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Protein sequence | MTTFINIHTL ISHPSSMMNR DDSGMQKTAV FGGSVRSRIS SQCLKRAIRQ SDIYGEAVAE KSIRTNKFDE LLDLCKEAMP ETDIKLIEDV LLNMGSKVTK DKKTEIRNFD AVQPYAIGSI REAINMVNEG TELKDLKKIV QIPTIDVALS GRMDASCPPR NVEAAMSVAH SLTTHSADIE VDWFTACDDL AEQGSGHIGT TEFSSGVFYR YASINVDLLA KNVKSTVSEV TPIINTMIRC FAQVSPSAKQ KVFAAYNQAD FVMATHSNQP ISLANAFRKP IENNGDVMEN SIAALVKHYE KLTNAYELDS KAIALDLTDS AQSKQINLVN KISDIRF
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