Gene Ping_1574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1574 
Symbol 
ID4625426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1923182 
End bp1924378 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content43% 
IMG OID639796762 
Productmajor facilitator transporter 
Protein accessionYP_942972 
Protein GI119945292 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2807] Cyanate permease 
TIGRFAM ID[TIGR00896] cyanate transporter 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.307108 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.381879 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCATCCAG TTTTGCCTAC CCGCTCTATT TTCTCATCTG CTATTTTGAT CCTTGGTATT 
TTATTTATCG CCGCTAATCT ACGTGGACCA ATAACAGGTA TTGGACCAGT ACTTGATCAA
ATTATTGAGA GCTTTGCATT AAGCGCTCCT CAAGCGGGTA TGCTAACCAC TTTGCCATTA
CTCGCATTTG CTATCGCCTC GCCAATGGCA ACGAGCTTAG CTAAAAAGCA AGGCCTTGAA
ATATCACTGT TTGTTGCGTT AGTGCTGATT GGTTTAGGGC TGAGTTCCCG GCTGATAGAT
TCTGCTGTTG TGCTTTATAT TGGTACTGCC GTCATTGGGG CCGGAATTGC CATTGGTAAT
GTATTGTTAC CGAGTTTAAT TAAGCGTGAT TTTCCGCATA AAGTCGCGGT AATGACCTCT
GCCTATGTAC TCGCTATGGG GATTTTTGCT GGTAGTTATT CTGCCTTACT TATTCCTTTA
GCCGCCTATA AAGAAATAGG TTGGCAAATT GCTTTAGCCA GTTACGGATT AGTGACGCTA
ATAAGTCTCC TTGTTTGGTT ACCGCAATTA AAGTTACATA CCAAACCAAC TAGAGATATT
ACTCAACCGG ATACCCAGGG TAAAATTTGG CATCATGCTT TGGCGTGGCA TATTACTTTG
TGTTTGGGTC TTAATTCATT TTTTACTTAT GTGATGATTG CTTGGTTACC TAATATATTA
ATGGAGGGCG GCCTCGATGC ACAGCAAGCT GGCGTGCTGC ATGGTGCATT TCAACTCGCC
TCTGCTGTGC CCGGAATTGT ACTTATTCCG CTATTAGGAA AATTAAAAGA TCAACGTTTA
CTTGCCCTGG GATTGGCGTT AATTGGGTGC TTTTGTTCAT TAGGGTTACT GTATTTACCA
AATTATGCTT TTATATGGTC AACCACTTTA GGCTTTTGTG CCGGGGCAAT TTTTATTTTA
GGACTGTCAT ATATTAGTTT ACGCACACAT CACTCAGGCC AAGCCTCATC GCTGTCGGGT
ATGGCGCAGT GCGTAGGTTA CTTACTTGCT GCTATCGGCC CCATGTTTGC AGGATCTTTG
CATACTCACT TTGAAAGCTG GGCACCTGTA CTGTGGTTAT GTGCTTTAGC AAGTCTGCTC
TGTGGTGTGT TTGGTTATTT AGGCGGGCGT AACATTACTT TGAGCGAGTC ACTTTAA
 
Protein sequence
MHPVLPTRSI FSSAILILGI LFIAANLRGP ITGIGPVLDQ IIESFALSAP QAGMLTTLPL 
LAFAIASPMA TSLAKKQGLE ISLFVALVLI GLGLSSRLID SAVVLYIGTA VIGAGIAIGN
VLLPSLIKRD FPHKVAVMTS AYVLAMGIFA GSYSALLIPL AAYKEIGWQI ALASYGLVTL
ISLLVWLPQL KLHTKPTRDI TQPDTQGKIW HHALAWHITL CLGLNSFFTY VMIAWLPNIL
MEGGLDAQQA GVLHGAFQLA SAVPGIVLIP LLGKLKDQRL LALGLALIGC FCSLGLLYLP
NYAFIWSTTL GFCAGAIFIL GLSYISLRTH HSGQASSLSG MAQCVGYLLA AIGPMFAGSL
HTHFESWAPV LWLCALASLL CGVFGYLGGR NITLSESL