Gene Ping_1545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1545 
Symbol 
ID4626211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1893992 
End bp1894465 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content35% 
IMG OID639796742 
Producthypothetical protein 
Protein accessionYP_942952 
Protein GI119945272 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1664] Integral membrane protein CcmA involved in cell shape determination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.353518 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.46336 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATTAT TTAGTTCAAA AACAGGAACA ACAGATCAAC ATTCAACTGC AACTGTTATC 
GCAACTGGAT GCAGCATTAC TGGTACAGTC CAATTAGCAT GCGACATTCA AATTGACGGT
GAAGTTGAAG GGAAAATAAT CTCTGAAAAA TCAATTGTCA TTAGCCATTC AGGTAAGGTC
AAAGGCGAAG TTTATGCTAA TAATGTCATC ATTAATGGCA CTCTAGAGGG AACTGTTCAC
GCAGATAGCA TAGAAATTTT AGAGAAAGGT CAAATTAATG GATCGATATA CACTGATAAG
TTAAGTATCG ATAAAGGGGG ATTATTCCTA GGCAATACTA ATCCTAGAAA AAATGATCAA
GTAACTAGCA TCAGTAGTAA CGAAAAAGAA ATGTTGATAA AGCCTGAGAA CAAAAGTAGT
CACGAAAAAG AAATGTTGAT AAAGCCTGAG AGCAAAAAAA ACATCAATAA ATAA
 
Protein sequence
MGLFSSKTGT TDQHSTATVI ATGCSITGTV QLACDIQIDG EVEGKIISEK SIVISHSGKV 
KGEVYANNVI INGTLEGTVH ADSIEILEKG QINGSIYTDK LSIDKGGLFL GNTNPRKNDQ
VTSISSNEKE MLIKPENKSS HEKEMLIKPE SKKNINK